RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 PLLPQ9Y342 182 aa13.82□□□□□ -0.2
LIG1-215ENST00000597901 GTF3C1Q12789 2109 aa13.82□□□□□ -0.2
LIG1-215ENST00000597901 CELSR2Q9HCU4 2923 aa13.82□□□□□ -0.2
LIG1-215ENST00000597901 FIGNL2A6NMB9 653 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 CDH16O75309 829 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 BCAS2O75934 225 aaPredicted RBP13.81□□□□□ -0.2
LIG1-215ENST00000597901 HOXD4P09016 255 aaPredicted RBP13.81□□□□□ -0.2
LIG1-215ENST00000597901 GLI4P10075 376 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 ENDOUP21128 410 aaKnown RBP13.81□□□□□ -0.2
LIG1-215ENST00000597901 CHRNB4P30926 498 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 TRPC1P48995 793 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 DCAF7P61962 342 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 MRPS35P82673 323 aaKnown RBP13.81□□□□□ -0.2
LIG1-215ENST00000597901 NNATQ16517 81 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 PRSS53Q2L4Q9 553 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 ZNF628Q5EBL2 1059 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 FNDC7Q5VTL7 733 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 DESI1Q6ICB0 168 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 FRMD7Q6ZUT3 714 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 ZNF295-AS1Q8N0V1 137 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 C4orf33Q8N1A6 199 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 OR10Q1Q8NGQ4 319 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 NEIL3Q8TAT5 605 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 ZNF675Q8TD23 568 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 KAT2AQ92830 837 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 HGDQ93099 445 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 RILPQ96NA2 401 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 GNRHR2Q96P88 292 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 EBPLQ9BY08 206 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 SHCBP1LQ9BZQ2 653 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 ENKD1Q9H0I2 346 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 ANKRA2Q9H9E1 313 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 TNFRSF12AQ9NP84 129 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 B4GALT7Q9UBV7 327 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 GPR55Q9Y2T6 319 aaPredicted RBP13.81□□□□□ -0.2
LIG1-215ENST00000597901 FAM215AQ9Y5M1 114 aa13.81□□□□□ -0.2
LIG1-215ENST00000597901 TO15178 435 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 ACOX3O15254 700 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 WDR1O75083 606 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 CRCPO75575 148 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 TRAPPC6AO75865 159 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 ELAVL4P26378 380 aaKnown RBP13.8□□□□□ -0.2
LIG1-215ENST00000597901 GDF1P27539 372 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 MPIP34949 423 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 GSTM5P46439 218 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 CEBPEQ15744 281 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 IMPG1Q17R60 797 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 B3GNT6Q6ZMB0 384 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 C10orf107Q8IVU9 208 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 LIX1Q8N485 282 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 ACBD4Q8NC06 268 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 OR9A2Q8NGT5 310 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 OR2W6PQ8NHA6 318 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.8□□□□□ -0.2
LIG1-215ENST00000597901 ERP27Q96DN0 273 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 OMA1Q96E52 524 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 ZNF597Q96LX8 424 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 NODALQ96S42 347 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 SLC6A15Q9H2J7 730 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 KCNJ16Q9NPI9 418 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 RRAGDQ9NQL2 400 aaPredicted RBP13.8□□□□□ -0.2
LIG1-215ENST00000597901 GIMAP4Q9NUV9 329 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 EHD3Q9NZN3 535 aa13.8□□□□□ -0.2
LIG1-215ENST00000597901 WBP11Q9Y2W2 641 aaKnown RBP13.8□□□□□ -0.2
LIG1-215ENST00000597901 CENPEQ02224 2701 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 ITPR2Q14571 2701 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 NKX2-6A6NCS4 301 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 MYO1GB0I1T2 1018 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 ICOSLGO75144 302 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 NME6O75414 186 aaPredicted RBP13.79□□□□□ -0.2
LIG1-215ENST00000597901 TOXO94900 526 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 HPNP05981 417 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 UROSP10746 265 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 GABRA1P14867 456 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 DDCP20711 480 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 MASP1P48740 699 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 CDK9P50750 372 aaKnown RBP13.79□□□□□ -0.2
LIG1-215ENST00000597901 C1orf185Q5T7R7 199 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 LIPMQ5VYY2 423 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 TIGD3Q6B0B8 471 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 FAM71E1Q6IPT2 247 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 SLC30A6Q6NXT4 461 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 FAM76AQ8TAV0 307 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 TMEM41AQ96HV5 264 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 BBS4Q96RK4 519 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 TIMP4Q99727 224 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 GATA5Q9BWX5 397 aaPredicted RBP13.79□□□□□ -0.2
LIG1-215ENST00000597901 TRIM8Q9BZR9 551 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 UBQLN3Q9H347 655 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 METTL7AQ9H8H3 244 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 TAS2R7Q9NYW3 318 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 CCL27Q9Y4X3 112 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 PCDHGB3Q9Y5G1 929 aa13.79□□□□□ -0.2
LIG1-215ENST00000597901 NCOA6Q14686 2063 aaPredicted RBP13.78□□□□□ -0.2
LIG1-215ENST00000597901 PCNX1Q96RV3 2341 aa13.78□□□□□ -0.2
LIG1-215ENST00000597901 A0A0G2JNJ9 132 aa13.78□□□□□ -0.2
LIG1-215ENST00000597901 C2orf72A6NCS6 295 aa13.78□□□□□ -0.2
LIG1-215ENST00000597901 FRG2CA6NGY1 282 aa13.78□□□□□ -0.2
LIG1-215ENST00000597901 GNB5O14775 395 aa13.78□□□□□ -0.2
LIG1-215ENST00000597901 PLOD3O60568 738 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms