RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 CEBPEQ15744 281 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 FAAH2Q6GMR7 532 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 HACD2Q6Y1H2 254 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 ZNF621Q6ZSS3 439 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 ZNF551Q7Z340 670 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 ARPINQ7Z6K5 226 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 YTHDF3Q7Z739 585 aaKnown RBP11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 RETREG3Q86VR2 466 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 ST13P4Q8IZP2 240 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 Q8NA96 180 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 OR9A2Q8NGT5 310 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 SUN3Q8TAQ9 357 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 GTF2H4Q92759 462 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 TSLPQ969D9 159 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 KIAA1143Q96AT1 154 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 SPSB2Q99619 263 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 INPP5KQ9BT40 448 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 AKIRIN1Q9H9L7 192 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 SERHLQ9NQF3 203 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 NECTIN3Q9NQS3 549 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 CROTQ9UKG9 612 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 MRPS18BQ9Y676 258 aaKnown RBP11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 IGKV3D-11A0A0A0MRZ8 115 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 RNF103-CHMP3A0A140T963 221 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 MYOCOSA0A1B0GUC4 107 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 A0A1W2PS29 197 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 OR2W5A6NFC9 320 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 TGFBR3LH3BV60 316 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 PCDH17O14917 1159 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 GYG2O15488 501 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 SCN2BO60939 215 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 IGHEP01854 428 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 GSNP06396 782 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 TNNI3P19429 210 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 PPIBP23284 216 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 CHI3L1P36222 383 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 DLSTP36957 453 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 CDKN2CP42773 168 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 CDK9P50750 372 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 PRR5P85299 388 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 DUSP2Q05923 314 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 DNASE1L3Q13609 305 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 CAPRIN1Q14444 709 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 LTB4RQ15722 352 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 DNAL1Q4LDG9 190 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 LRIF1Q5T3J3 769 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 BHLHB9Q6PI77 547 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 TMEM107Q6UX40 140 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 ANGPTL8Q6UXH0 198 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 RINLQ6ZS11 566 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 ZNF771Q7L3S4 317 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 LAPTM4BQ86VI4 370 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 GALNT12Q8IXK2 581 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 RBM15BQ8NDT2 890 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 PLPP5Q8NEB5 264 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 OR2Y1Q8NGV0 311 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 GOT1L1Q8NHS2 421 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 SFXN5Q8TD22 340 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 RIT1Q92963 219 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 MOAP1Q96BY2 351 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 MAGED4Q96JG8 741 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 CGREF1Q99674 301 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 SLC35A5Q9BS91 424 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 GPR87Q9BY21 358 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 PAIP1Q9H074 479 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 C3orf14Q9HBI5 128 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 ADAP2Q9NPF8 381 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 PNO1Q9NRX1 252 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 DDX18Q9NVP1 670 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 KCND3Q9UK17 655 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 CORO2BQ9UQ03 480 aa11.23□□□□□ -0.61
SHKBP1-213ENST00000597325 TCRBV16S1A1N1A0A5B0 115 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 C17orf105B2RV13 164 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 CNOT3O75175 753 aaKnown RBP11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 RECKO95980 971 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 ZCCHC18P0CG32 403 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 UQCRC2P22695 453 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 F8A1P23610 371 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 GALNSP34059 522 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 PTGER1P34995 402 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 MC3RP41968 323 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 PGDP52209 483 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 OR4D2P58180 307 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 GAB1Q13480 694 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 ELAVL1Q15717 326 aaKnown RBP11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 CPZQ66K79 652 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 TMEM64Q6YI46 380 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 PGAM4Q8N0Y7 254 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 VWA5B2Q8N398 1253 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 ADCY4Q8NFM4 1077 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 OR56A1Q8NGH5 318 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 OR5AK3PQ8NH89 298 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 OR14A16Q8NHC5 309 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 PSMA8Q8TAA3 256 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 ZNF675Q8TD23 568 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 KAT2AQ92830 837 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 DAZLQ92904 295 aaKnown RBP11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 PPWD1Q96BP3 646 aaKnown RBP11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 LRRC58Q96CX6 371 aa11.22□□□□□ -0.61
SHKBP1-213ENST00000597325 ART5Q96L15 291 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms