RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 PSPHP78330 225 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 ZNF763Q0D2J5 394 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 SNTA1Q13424 505 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 KIAA0040Q15053 153 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 CDSNQ15517 529 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 LTB4RQ15722 352 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 IMPG1Q17R60 797 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 FAM71E1Q6IPT2 247 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 NOXRED1Q6NXP6 359 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 FAM180BQ6P0A1 224 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 RNF165Q6ZSG1 346 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 NCCRP1Q6ZVX7 275 aaPredicted RBP9.65□□□□□ -0.86
CCDC9-203ENST00000596938 ACAD11Q709F0 780 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 TRABD2AQ86V40 505 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 PACS2Q86VP3 889 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 C10orf107Q8IVU9 208 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 SIMC1Q8NDZ2 872 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 OR52R1Q8NGF1 315 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 OR2W6PQ8NHA6 318 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 LILRB4Q8NHJ6 448 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 AENQ8WTP8 325 aaKnown RBP9.65□□□□□ -0.86
CCDC9-203ENST00000596938 CA5BP1Q8WTZ4 195 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 ASB5Q8WWX0 329 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 RND1Q92730 232 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 CAVIN3Q969G5 261 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 SARAFQ96BY9 339 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 TMEM109Q9BVC6 243 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 GATA5Q9BWX5 397 aaPredicted RBP9.65□□□□□ -0.86
CCDC9-203ENST00000596938 STMN4Q9H169 189 aaPredicted RBP9.65□□□□□ -0.86
CCDC9-203ENST00000596938 TNFRSF12AQ9NP84 129 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 PNPLA3Q9NST1 481 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 B4GALT7Q9UBV7 327 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 ACAD8Q9UKU7 415 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 GPR55Q9Y2T6 319 aaPredicted RBP9.65□□□□□ -0.86
CCDC9-203ENST00000596938 LIPGQ9Y5X9 500 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 DIDO1Q9BTC0 2240 aaKnown RBP9.65□□□□□ -0.86
CCDC9-203ENST00000596938 CROCCQ5TZA2 2017 aa9.65□□□□□ -0.87
CCDC9-203ENST00000596938 LRBAP50851 2863 aa9.65□□□□□ -0.87
CCDC9-203ENST00000596938 FRG2CA6NGY1 282 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 FIGNL2A6NMB9 653 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 MYO1GB0I1T2 1018 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 AZIN1O14977 448 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 WDR1O75083 606 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 SLITRK5O94991 958 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 SLU7O95391 586 aaKnown RBP9.64□□□□□ -0.87
CCDC9-203ENST00000596938 ACVR2AP27037 513 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 CHRNB4P30926 498 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 PTGER4P35408 488 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 MRPS35P82673 323 aaKnown RBP9.64□□□□□ -0.87
CCDC9-203ENST00000596938 IFFO1Q0D2I5 559 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 C2orf80Q0P641 193 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 PMPCAQ10713 525 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 PCLAFQ15004 111 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 WLSQ5T9L3 541 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 FNDC7Q5VTL7 733 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 TIGD3Q6B0B8 471 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 Q6ZSR9 355 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 IKBIPQ70UQ0 350 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 PRR22Q8IZ63 422 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 OR5M9Q8NGP3 310 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 OR9A2Q8NGT5 310 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 NEIL3Q8TAT5 605 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 HGDQ93099 445 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 EXOSC8Q96B26 276 aaKnown RBP9.64□□□□□ -0.87
CCDC9-203ENST00000596938 SDCCAG3Q96C92 435 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 TMEM41AQ96HV5 264 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 APOPT1Q96IL0 206 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 ZNF597Q96LX8 424 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 JSRP1Q96MG2 331 aaPredicted RBP9.64□□□□□ -0.87
CCDC9-203ENST00000596938 RILPQ96NA2 401 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 GNRHR2Q96P88 292 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 BTBD9Q96Q07 612 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 BBS4Q96RK4 519 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 SPOCK3Q9BQ16 436 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 EBPLQ9BY08 206 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 ITPAQ9BY32 194 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 IQCGQ9H095 443 aaKnown RBP9.64□□□□□ -0.87
CCDC9-203ENST00000596938 UBQLN3Q9H347 655 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 MYNNQ9NPC7 610 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 PFDN4Q9NQP4 134 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 MYO7BQ6PIF6 2116 aa9.64□□□□□ -0.87
CCDC9-203ENST00000596938 A0A087WV62 115 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 OR6C70A6NIJ9 312 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 PLOD2O00469 737 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 RGS14O43566 566 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 NPHS1O60500 1241 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 ABCB7O75027 752 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 ICOSLGO75144 302 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 SEC22BO75396 215 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 LRATO95237 230 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 HPNP05981 417 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 CT45A8P0DMV1 189 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 CT45A9P0DMV2 189 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 PRF1P14222 555 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 GABRA1P14867 456 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 ENDOUP21128 410 aaKnown RBP9.63□□□□□ -0.87
CCDC9-203ENST00000596938 ELAVL4P26378 380 aaKnown RBP9.63□□□□□ -0.87
CCDC9-203ENST00000596938 ALDH3A1P30838 453 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 KIR3DL1P43629 444 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 PLCXD2Q0VAA5 305 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms