RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 KLF11O14901 512 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 COQ9O75208 318 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 P04436 131 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 IFI6P09912 130 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 DDX5P17844 614 aaKnown RBP13.41□□□□□ -0.26
VRK3-206ENST00000594090 RPL3P39023 403 aaKnown RBP13.41□□□□□ -0.26
VRK3-206ENST00000594090 RFC3P40938 356 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 PPICP45877 212 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 DCAF7P61962 342 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 HSPB3Q12988 150 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 RPS6KA2Q15349 733 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 EIF2S3LQ2VIR3 472 aaKnown RBP13.41□□□□□ -0.26
VRK3-206ENST00000594090 RNFT1Q5M7Z0 435 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 ZNF551Q7Z340 670 aaPredicted RBP13.41□□□□□ -0.26
VRK3-206ENST00000594090 SIAH3Q8IW03 269 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 PRR22Q8IZ63 422 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 FBXW8Q8N3Y1 598 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 OR2M7Q8NG81 312 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 OR7A2PQ8NGA2 310 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 OR5M3Q8NGP4 307 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 ZFP28Q8NHY6 868 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 ZBED6CLQ96FA7 236 aaPredicted RBP13.41□□□□□ -0.26
VRK3-206ENST00000594090 VSTM2LQ96N03 204 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 GPR137Q96N19 417 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 TSPAN10Q9H1Z9 355 aaPredicted RBP13.41□□□□□ -0.26
VRK3-206ENST00000594090 FOLH1BQ9HBA9 442 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 TAS2R9Q9NYW1 312 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 SEC14L3Q9UDX4 400 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 MARCOQ9UEW3 520 aaPredicted RBP13.41□□□□□ -0.26
VRK3-206ENST00000594090 NPFFR2Q9Y5X5 522 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 CHCHD2Q9Y6H1 151 aaPredicted RBP13.41□□□□□ -0.26
VRK3-206ENST00000594090 CLEC18AA5D8T8 446 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 SDHDO14521 159 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 ACOX3O15254 700 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 HDAC3O15379 428 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 NME6O75414 186 aaPredicted RBP13.4□□□□□ -0.26
VRK3-206ENST00000594090 WISP2O76076 250 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 KITP10721 976 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 G6PDP11413 515 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 PRPS1L1P21108 318 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 CNR1P21554 472 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 DRD5P21918 477 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 FBXW4P57775 412 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 SLC22A10Q63ZE4 541 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 CLEC18BQ6UXF7 455 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 GFRALQ6UXV0 394 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 GK5Q6ZS86 529 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 FAM47EQ6ZV65 393 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 LRRC34Q8IZ02 419 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 OR2L13Q8N349 312 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 CLEC18CQ8NCF0 446 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 PRR7Q8TB68 274 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 ZNF75CPQ92670 426 aaPredicted RBP13.4□□□□□ -0.26
VRK3-206ENST00000594090 ELP4Q96EB1 424 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 HSPBAP1Q96EW2 488 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 FAM173AQ9BQD7 235 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 ACSS1Q9NUB1 689 aaPredicted RBP13.4□□□□□ -0.26
VRK3-206ENST00000594090 DDX18Q9NVP1 670 aaKnown RBP13.4□□□□□ -0.26
VRK3-206ENST00000594090 CNIH4Q9P003 139 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 C19orf53Q9UNZ5 99 aaPredicted RBP13.4□□□□□ -0.26
VRK3-206ENST00000594090 GPR55Q9Y2T6 319 aaPredicted RBP13.4□□□□□ -0.26
VRK3-206ENST00000594090 UBR5O95071 2799 aaPredicted RBP13.4□□□□□ -0.26
VRK3-206ENST00000594090 EML6Q6ZMW3 1958 aa13.4□□□□□ -0.26
VRK3-206ENST00000594090 GCN1Q92616 2671 aaKnown RBP13.4□□□□□ -0.26
VRK3-206ENST00000594090 NPIPA5E9PKD4 350 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 SLCO1B7G3V0H7 640 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 UPK1AO00322 258 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 TFECO14948 347 aaPredicted RBP13.39□□□□□ -0.27
VRK3-206ENST00000594090 TO15178 435 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 ERN1O75460 977 aaKnown RBP13.39□□□□□ -0.27
VRK3-206ENST00000594090 PPM1BO75688 479 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 UNC5CO95185 931 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 PSMG1O95456 288 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 CT45A8P0DMV1 189 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 CT45A9P0DMV2 189 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 LBPP18428 481 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 EFNA1P20827 205 aaPredicted RBP13.39□□□□□ -0.27
VRK3-206ENST00000594090 GPC1P35052 558 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 PIGAP37287 484 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 DNASE1L1P49184 302 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 CDK9P50750 372 aaKnown RBP13.39□□□□□ -0.27
VRK3-206ENST00000594090 DIO3P55073 304 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 MANFP55145 182 aaKnown RBP13.39□□□□□ -0.27
VRK3-206ENST00000594090 CLDN8P56748 225 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 CORO7P57737 925 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 KCNK10P57789 538 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 C21orf58P58505 322 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 PPP2R2AP63151 447 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 SRSF1Q07955 248 aaKnown RBP eCLIP13.39□□□□□ -0.27
VRK3-206ENST00000594090 PLCXD2Q0VAA5 305 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 ZNF155Q12901 538 aaPredicted RBP13.39□□□□□ -0.27
VRK3-206ENST00000594090 CT45A2Q5DJT8 189 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 PRAMEF20Q5VT98 475 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 NPSR1Q6W5P4 371 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 LARP4Q71RC2 724 aaKnown RBP eCLIP13.39□□□□□ -0.27
VRK3-206ENST00000594090 WDR75Q8IWA0 830 aaKnown RBP13.39□□□□□ -0.27
VRK3-206ENST00000594090 RIMKLAQ8IXN7 391 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 KRTCAP2Q8N6L1 136 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 OMA1Q96E52 524 aa13.39□□□□□ -0.27
VRK3-206ENST00000594090 MAGED4Q96JG8 741 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms