RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 DIMT1Q9UNQ2 313 aaKnown RBP15.56■□□□□ 0.08
LIG1-206ENST00000594067 MYO7AQ13402 2215 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 EPPINO95925 133 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 RB1P06400 928 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 CCL5P13501 91 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 GIPRP48546 466 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 REEP5Q00765 189 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 SNAPC1Q16533 368 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 OR5K2Q8NHB8 316 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 DPH7Q9BTV6 452 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 PRR14Q9BWN1 585 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 TMEM245Q9H330 911 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 WASH6PQ9NQA3 447 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 KIAA1549LQ6ZVL6 1849 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 A0A1W2PRQ8 180 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 POLR1CO15160 346 aaPredicted RBP15.55■□□□□ 0.08
LIG1-206ENST00000594067 SSTR4P31391 388 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 BUD31P41223 144 aaPredicted RBP15.55■□□□□ 0.08
LIG1-206ENST00000594067 ALDH6A1Q02252 535 aaKnown RBP15.55■□□□□ 0.08
LIG1-206ENST00000594067 GPR19Q15760 415 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 LYPD8Q6UX82 237 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 WFIKKN2Q8TEU8 576 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 C17orf62Q9BQA9 187 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 LGR4Q9BXB1 951 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 PLA2G12AQ9BZM1 189 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 EGLN3Q9H6Z9 239 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 FBXW2Q9UKT8 454 aa15.55■□□□□ 0.08
LIG1-206ENST00000594067 A0A1W2PPV9 198 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 ANTXRLA6NF34 631 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 OR6C70A6NIJ9 312 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 PCCBP05166 539 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 CLTBP09497 229 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 ERGP11308 486 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 EPCAMP16422 314 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 HLA-DMAP28067 261 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 VASPP50552 380 aaPredicted RBP15.54■□□□□ 0.08
LIG1-206ENST00000594067 GPLD1P80108 840 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 EFR3AQ14156 821 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 HNRNPA1L2Q32P51 320 aaKnown RBP15.54■□□□□ 0.08
LIG1-206ENST00000594067 PAMR1Q6UXH9 720 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 HSDL2Q6YN16 418 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 REM2Q8IYK8 340 aaPredicted RBP15.54■□□□□ 0.08
LIG1-206ENST00000594067 CAMKK1Q8N5S9 505 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 MRPL43Q8N983 215 aaKnown RBP15.54■□□□□ 0.08
LIG1-206ENST00000594067 TP53I13Q8NBR0 393 aaPredicted RBP15.54■□□□□ 0.08
LIG1-206ENST00000594067 TMIEQ8NEW7 156 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 AMDHD1Q96NU7 426 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 MACROD1Q9BQ69 325 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 GON7Q9BXV9 100 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 QRSL1Q9H0R6 528 aaKnown RBP15.54■□□□□ 0.08
LIG1-206ENST00000594067 IRF2BPLQ9H1B7 796 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 ACSS1Q9NUB1 689 aaPredicted RBP15.54■□□□□ 0.08
LIG1-206ENST00000594067 TOR4AQ9NXH8 423 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 TESQ9UGI8 421 aaKnown RBP15.54■□□□□ 0.08
LIG1-206ENST00000594067 GPR52Q9Y2T5 361 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 CKAP5Q14008 2032 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 NOTCH4Q99466 2003 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 A0A0G2JMP0 313 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 SLC9A3R1O14745 358 aaPredicted RBP15.54■□□□□ 0.08
LIG1-206ENST00000594067 CHRM4P08173 479 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 TSPAN19P0C672 248 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 PPP2R1BP30154 601 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 SSR2P43308 183 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 NCBP2P52298 156 aaKnown RBP eCLIP15.54■□□□□ 0.08
LIG1-206ENST00000594067 RPS25P62851 125 aaKnown RBP15.54■□□□□ 0.08
LIG1-206ENST00000594067 FAPQ12884 760 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 NDUFAF5Q5TEU4 345 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 SHFQ7M4L6 423 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 KIF18BQ86Y91 864 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 LIX1LQ8IVB5 337 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 FAM20CQ8IXL6 584 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 IL17RCQ8NAC3 791 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 MORN4Q8NDC4 146 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 CXorf40AQ8TE69 158 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 GATAD2BQ8WXI9 593 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 MENTQ9BUN1 341 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 PRRG3Q9BZD7 231 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 SLC9A8Q9Y2E8 581 aa15.54■□□□□ 0.08
LIG1-206ENST00000594067 LTBP2Q14767 1821 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 CPEP16870 476 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 DDX5P17844 614 aaKnown RBP15.53■□□□□ 0.08
LIG1-206ENST00000594067 SDC2P34741 201 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 SLC9A3P48764 834 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 COX10Q12887 443 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 FAM214AQ32MH5 1076 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 ZNF750Q32MQ0 723 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 PYDC2Q56P42 97 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 OR4C11Q6IEV9 310 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 TCTE3Q8IZS6 198 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 YIPF7Q8N8F6 280 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 SYT14Q8NB59 555 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 TM9SF4Q92544 642 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 RSPRY1Q96DX4 576 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 C1GALT1C1Q96EU7 318 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 TCF20Q9UGU0 1960 aaKnown RBP15.53■□□□□ 0.08
LIG1-206ENST00000594067 CACNB4O00305 520 aaPredicted RBP15.53■□□□□ 0.08
LIG1-206ENST00000594067 CPNE3O75131 537 aaKnown RBP15.53■□□□□ 0.08
LIG1-206ENST00000594067 ERAL1O75616 437 aaKnown RBP15.53■□□□□ 0.08
LIG1-206ENST00000594067 NTN1O95631 604 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 MYL12AP19105 171 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms