RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 FAF1Q9UNN5 650 aaPredicted RBP12.38□□□□□ -0.43
VRK3-205ENST00000593919 SAMD4AQ9UPU9 718 aaKnown RBP12.38□□□□□ -0.43
VRK3-205ENST00000593919 MRPS33Q9Y291 106 aaKnown RBP12.38□□□□□ -0.43
VRK3-205ENST00000593919 U3KQV3 271 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 A0A1B0GX78 115 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 DSCR3O14972 297 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 CBFA2T3O75081 653 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 TIAF1O95411 115 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 HPRP00739 348 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 ATP1B1P05026 303 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 PRKACGP22612 351 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 CALRP27797 417 aaKnown RBP12.38□□□□□ -0.43
VRK3-205ENST00000593919 YAP1P46937 504 aaKnown RBP12.38□□□□□ -0.43
VRK3-205ENST00000593919 ROR2Q01974 943 aaKnown RBP12.38□□□□□ -0.43
VRK3-205ENST00000593919 SLC13A2Q13183 592 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 YOD1Q5VVQ6 348 aaPredicted RBP12.38□□□□□ -0.43
VRK3-205ENST00000593919 CEACAM20Q6UY09 585 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 ZNF595Q8IYB9 648 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 EID3Q8N140 333 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 HORMAD2Q8N7B1 307 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 SFXN5Q8TD22 340 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 ELP4Q96EB1 424 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 MPP4Q96JB8 637 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 PRRX2Q99811 253 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 SERHL2Q9H4I8 314 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 OCIAD1Q9NX40 245 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 RARRES3Q9UL19 164 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 CEPT1Q9Y6K0 416 aa12.38□□□□□ -0.43
VRK3-205ENST00000593919 OR2W5A6NFC9 320 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 TGFBR3LH3BV60 316 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 JRKO75564 520 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 FHP07954 510 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 PPP2R1BP30154 601 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 CSTF2P33240 577 aaKnown RBP eCLIP12.37□□□□□ -0.43
VRK3-205ENST00000593919 PRKAG1P54619 331 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 PRR5P85299 388 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 TRA2AQ13595 282 aaKnown RBP eCLIP12.37□□□□□ -0.43
VRK3-205ENST00000593919 CSRP2Q16527 193 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 GCNT6Q5T4J0 391 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 C1orf189Q5VU69 101 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 B3GNT6Q6ZMB0 384 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 C11orf65Q8NCR3 313 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 OR7G2Q8NG99 324 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 OR5K1Q8NHB7 308 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 SLC35G5Q96KT7 338 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 OSBPL10Q9BXB5 764 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 APMAPQ9HDC9 416 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 VCX3AQ9NNX9 186 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 NCDNQ9UBB6 729 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 CDC14AQ9UNH5 594 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 SRPK3Q9UPE1 567 aa12.37□□□□□ -0.43
VRK3-205ENST00000593919 ZFHX2Q9C0A1 2572 aaPredicted RBP12.37□□□□□ -0.43
VRK3-205ENST00000593919 BLACEA4D250 179 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 C4orf47A7E2U8 309 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 EMC8O43402 210 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 HS6ST1O60243 411 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 GDF9O60383 454 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 ELK4P28324 431 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 SOX18P35713 384 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 DCTP40126 519 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 PRIM2P49643 509 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 TPD52P55327 224 aaPredicted RBP12.36□□□□□ -0.43
VRK3-205ENST00000593919 DSTNP60981 165 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 BTG2P78543 158 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 LSAMPQ13449 338 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 VEZF1Q14119 521 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 DSG2Q14126 1118 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 RHBDD2Q6NTF9 364 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 PWWP2BQ6NUJ5 590 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 BORAQ6PGQ7 559 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 BHLHB9Q6PI77 547 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 FAM111BQ6SJ93 734 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 FKBP9P1Q75LS8 142 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 OR56A1Q8NGH5 318 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 ZFAND2BQ8WV99 257 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 MOAP1Q96BY2 351 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 MBOAT4Q96T53 435 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 RBM4BQ9BQ04 359 aaKnown RBP12.36□□□□□ -0.43
VRK3-205ENST00000593919 RBM4Q9BWF3 364 aaKnown RBP12.36□□□□□ -0.43
VRK3-205ENST00000593919 YIPF2Q9BWQ6 316 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 SLC7A5P2Q9GIP4 190 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 TMEM38AQ9H6F2 299 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 C3orf14Q9HBI5 128 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 ZNF304Q9HCX3 659 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 PRTFDC1Q9NRG1 225 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 TUBA8Q9NY65 449 aaPredicted RBP12.36□□□□□ -0.43
VRK3-205ENST00000593919 VNN3Q9NY84 501 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 PTTG2Q9NZH5 202 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 TRPC4Q9UBN4 977 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 ABCG2Q9UNQ0 655 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 CLDN16Q9Y5I7 305 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 EFCAB7A8K855 629 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 hCG_2039718K7EN88 272 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 HMGN4O00479 90 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 CLDN4O14493 209 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 CTNSO60931 367 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 SCRG1O75711 98 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 HMGN2P05204 90 aaKnown RBP12.36□□□□□ -0.43
VRK3-205ENST00000593919 MAOAP21397 527 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 FBLP22087 321 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms