RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 STAMBPO95630 424 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 CPSF4O95639 269 aaKnown RBP11.1□□□□□ -0.63
DDX39A-219ENST00000592927 PRF1P14222 555 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 MAOAP21397 527 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 PTPN6P29350 595 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 PPP2R1BP30154 601 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 ALDH9A1P49189 494 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 CDC20Q12834 499 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 STX4Q12846 297 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 BNIP2Q12982 314 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 CEACAM7Q14002 265 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 TRIM25Q14258 630 aaKnown RBP11.1□□□□□ -0.63
DDX39A-219ENST00000592927 C1orf146Q5VVC0 180 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 OR52E8Q6IFG1 317 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 ANKRD26P1Q6NSI1 321 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 SLC48A1Q6P1K1 146 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 RIPOR1Q6ZS17 1223 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 PPP1R32Q7Z5V6 425 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 ANKRD46Q86W74 232 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 C7orf57Q8NEG2 295 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 TNIP2Q8NFZ5 429 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 ZFP28Q8NHY6 868 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 CPT1CQ8TCG5 803 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 APOBEC4Q8WW27 367 aaKnown RBP11.1□□□□□ -0.63
DDX39A-219ENST00000592927 THAP4Q8WY91 577 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 JADE3Q92613 823 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 TSLPQ969D9 159 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 ASB9Q96DX5 294 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 ZBED6CLQ96FA7 236 aaPredicted RBP11.1□□□□□ -0.63
DDX39A-219ENST00000592927 POM121Q96HA1 1249 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 SLC39A3Q9BRY0 314 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 INPP5KQ9BT40 448 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 RASSF4Q9H2L5 321 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 DENND2DQ9H6A0 471 aaPredicted RBP11.1□□□□□ -0.63
DDX39A-219ENST00000592927 NEUROD4Q9HD90 331 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 GIMAP4Q9NUV9 329 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 TAS2R9Q9NYW1 312 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 VAPAQ9P0L0 249 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.1□□□□□ -0.63
DDX39A-219ENST00000592927 POMPQ9Y244 141 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 FBN3Q75N90 2809 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 FER1L5A0AVI2 2057 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 SYNDIG1LA6NDD5 238 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 PGRMC2O15173 223 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 LDB3O75112 727 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 HTR1EP28566 365 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 NTSP30990 170 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 EFNA3P52797 238 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 MANFP55145 182 aaKnown RBP11.09□□□□□ -0.63
DDX39A-219ENST00000592927 OR4D2P58180 307 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 ACTR3P61158 418 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 PLIN5Q00G26 463 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 CEBPEQ15744 281 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 DEFB109BQ30KR1 87 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 ATP1A1-AS1Q5TC04 95 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 TMEM205Q6UW68 189 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 KIRREL2Q6UWL6 708 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 ZNF621Q6ZSS3 439 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 ANKRD37Q7Z713 158 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 MRGPREQ86SM8 312 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 MSRB3Q8IXL7 192 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 CLECL1Q8IZS7 167 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 OR4A15Q8NGL6 344 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 ADAMTS17Q8TE56 1095 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 C8orf44Q96CB5 159 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 ECSITQ9BQ95 431 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 CPPED1Q9BRF8 314 aaPredicted RBP11.09□□□□□ -0.63
DDX39A-219ENST00000592927 THUMPD3Q9BV44 507 aaKnown RBP11.09□□□□□ -0.63
DDX39A-219ENST00000592927 SPATA9Q9BWV2 254 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 RAD21L1Q9H4I0 556 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 ALG2Q9H553 416 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 SLC35C2Q9NQQ7 365 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 NECTIN3Q9NQS3 549 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 P4HTMQ9NXG6 502 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 SLC25A37Q9NYZ2 338 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 UTS2RQ9UKP6 389 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 CES1P1Q9UKY3 287 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 ENTPD4Q9Y227 616 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 POLHQ9Y253 713 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 HS3ST3B1Q9Y662 390 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 ADGRG4Q8IZF6 3080 aa11.09□□□□□ -0.63
DDX39A-219ENST00000592927 F8P00451 2351 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 LOC102723996A0A087X1L8 192 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 IGKV3D-11A0A0A0MRZ8 115 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 WASHC1A8K0Z3 465 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 MYO1GB0I1T2 1018 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 CLIC1O00299 241 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 SOCS6O14544 535 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 FGF17O60258 216 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 BCAS2O75934 225 aaPredicted RBP11.08□□□□□ -0.64
DDX39A-219ENST00000592927 GPR75O95800 540 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 C6orf47O95873 294 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 IFNA16P05015 189 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 UQCRC2P22695 453 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 CDKN2CP42773 168 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 GSK3BP49841 420 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 MTPNP58546 118 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 HBA1P69905 142 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 ID2Q02363 134 aa11.08□□□□□ -0.64
DDX39A-219ENST00000592927 FOLH1Q04609 750 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms