RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 POLR3HQ9Y535 204 aaPredicted RBP12.73□□□□□ -0.37
APOC1-208ENST00000592535 CELSR2Q9HCU4 2923 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 ITPR2Q14571 2701 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 CENPEQ02224 2701 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 NME6O75414 186 aaPredicted RBP12.72□□□□□ -0.37
APOC1-208ENST00000592535 PPM1BO75688 479 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 ABCB1P08183 1280 aaPredicted RBP12.72□□□□□ -0.37
APOC1-208ENST00000592535 NUDT17P0C025 328 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 COX6B1P14854 86 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 ACVR2AP27037 513 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 GDF1P27539 372 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 CASP3P42574 277 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 KIR3DL1P43629 444 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 GSTM5P46439 218 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 EMDP50402 254 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 RPP38P78345 283 aaKnown RBP12.72□□□□□ -0.37
APOC1-208ENST00000592535 ZNF763Q0D2J5 394 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 C2orf80Q0P641 193 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 PLCXD2Q0VAA5 305 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 CEBPEQ15744 281 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 PRSS53Q2L4Q9 553 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 FNDC7Q5VTL7 733 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 CLEC6AQ6EIG7 209 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 TRIM46Q7Z4K8 759 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 TRABD2AQ86V40 505 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 MCEMP1Q8IX19 187 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 AENQ8WTP8 325 aaKnown RBP12.72□□□□□ -0.37
APOC1-208ENST00000592535 RND1Q92730 232 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 HGDQ93099 445 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 SARAFQ96BY9 339 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 OMA1Q96E52 524 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 HSPBAP1Q96EW2 488 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 APOPT1Q96IL0 206 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 GATA5Q9BWX5 397 aaPredicted RBP12.72□□□□□ -0.37
APOC1-208ENST00000592535 ANGPTL4Q9BY76 406 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 ACKR4Q9NPB9 350 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 SLC35C2Q9NQQ7 365 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 GIMAP4Q9NUV9 329 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 MKS1Q9NXB0 559 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 QPCTLQ9NXS2 382 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 B4GALT7Q9UBV7 327 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 PRODH2Q9UF12 536 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 MID2Q9UJV3 735 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 ACAD8Q9UKU7 415 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 CCL27Q9Y4X3 112 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 PTGDR2Q9Y5Y4 395 aa12.72□□□□□ -0.37
APOC1-208ENST00000592535 FIGNL2A6NMB9 653 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 RSL1D1O76021 490 aaKnown RBP12.71□□□□□ -0.37
APOC1-208ENST00000592535 SNX4O95219 450 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 UROSP10746 265 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 NAGAP17050 411 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 DDCP20711 480 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 DRD5P21918 477 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 PPICP45877 212 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 MASP1P48740 699 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 TRPC1P48995 793 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 PMPCAQ10713 525 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 WLSQ5T9L3 541 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 RTL6Q6ICC9 239 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 CCDC71Q8IV32 467 aaPredicted RBP12.71□□□□□ -0.37
APOC1-208ENST00000592535 SAMD14Q8IZD0 417 aaPredicted RBP12.71□□□□□ -0.37
APOC1-208ENST00000592535 FAM9CQ8IZT9 166 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 RIBC1Q8N443 379 aaPredicted RBP12.71□□□□□ -0.37
APOC1-208ENST00000592535 BANPQ8N9N5 519 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 NEIL3Q8TAT5 605 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.71□□□□□ -0.37
APOC1-208ENST00000592535 NTNG2Q96CW9 530 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 NODALQ96S42 347 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 RUBCNLQ9H714 662 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 MYNNQ9NPC7 610 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 EHD3Q9NZN3 535 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 GPR55Q9Y2T6 319 aaPredicted RBP12.71□□□□□ -0.37
APOC1-208ENST00000592535 FAM215AQ9Y5M1 114 aa12.71□□□□□ -0.37
APOC1-208ENST00000592535 TEX15Q9BXT5 2789 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 FRG2CA6NGY1 282 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 FAM90A27PA6NNH2 459 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 MYO1GB0I1T2 1018 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 GNB5O14775 395 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 TO15178 435 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 ACOX3O15254 700 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 TRIM13O60858 407 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 UGT2B11O75310 529 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 SPAG7O75391 227 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 BCAS2O75934 225 aaPredicted RBP12.7□□□□□ -0.38
APOC1-208ENST00000592535 ALDH3A1P30838 453 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 CHRNB4P30926 498 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 PTGER4P35408 488 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 PTGDSP41222 190 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 DCAF7P61962 342 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 IFFO1Q0D2I5 559 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 C1orf185Q5T7R7 199 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 FAM71E1Q6IPT2 247 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 NOXRED1Q6NXP6 359 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 B3GNT6Q6ZMB0 384 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 ACAD11Q709F0 780 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 NUP54Q7Z3B4 507 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 PACS2Q86VP3 889 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 SRRM1Q8IYB3 904 aaKnown RBP12.7□□□□□ -0.38
APOC1-208ENST00000592535 LIX1Q8N485 282 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 OR7G2Q8NG99 324 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms