RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 BUD31P41223 144 aaPredicted RBP14.79□□□□□ -0.04
MBD1-227ENST00000592060 RUNX2Q13950 521 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 SUZ12Q15022 739 aaKnown RBP14.79□□□□□ -0.04
MBD1-227ENST00000592060 SYT16Q17RD7 645 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 TIGD6Q17RP2 521 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 FBXO43Q4G163 708 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 FAM111BQ6SJ93 734 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 CD300LDQ6UXZ3 194 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 LINC00299Q6ZSB3 139 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 SLC46A3Q7Z3Q1 461 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 LRRC25Q8N386 305 aaPredicted RBP14.79□□□□□ -0.04
MBD1-227ENST00000592060 SLC44A3Q8N4M1 653 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 MORN4Q8NDC4 146 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 OR7G2Q8NG99 324 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 OR10G6Q8NH81 332 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 ZNF675Q8TD23 568 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 GPBAR1Q8TDU6 330 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 HMGB4Q8WW32 186 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 ZFPM2Q8WW38 1151 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 PATE1Q8WXA2 126 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 VMP1Q96GC9 406 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 TRNT1Q96Q11 434 aaKnown RBP14.79□□□□□ -0.04
MBD1-227ENST00000592060 ARHGDIGQ99819 225 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 FNDC11Q9BVV2 318 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 ACTRT3Q9BYD9 372 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 QRSL1Q9H0R6 528 aaKnown RBP14.79□□□□□ -0.04
MBD1-227ENST00000592060 SLC25A19Q9HC21 320 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 EVA1BQ9NVM1 165 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 CLN6Q9NWW5 311 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 ETAA1Q9NY74 926 aa14.79□□□□□ -0.04
MBD1-227ENST00000592060 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.79□□□□□ -0.04
MBD1-227ENST00000592060 GOLGA4Q13439 2230 aaKnown RBP14.79□□□□□ -0.04
MBD1-227ENST00000592060 J3QRK9 145 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 M0R3G1 203 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 NME6O75414 186 aaPredicted RBP14.78□□□□□ -0.04
MBD1-227ENST00000592060 ZIC2O95409 532 aaPredicted RBP14.78□□□□□ -0.04
MBD1-227ENST00000592060 PIPP12273 146 aaPredicted RBP14.78□□□□□ -0.04
MBD1-227ENST00000592060 CPN2P22792 545 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 LSSP48449 732 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 XKP51811 444 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 UBE2IP63279 158 aaKnown RBP14.78□□□□□ -0.04
MBD1-227ENST00000592060 ALDH6A1Q02252 535 aaKnown RBP14.78□□□□□ -0.04
MBD1-227ENST00000592060 CHRNEQ04844 493 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 ILF3Q12906 894 aaKnown RBP eCLIP14.78□□□□□ -0.04
MBD1-227ENST00000592060 TRIM48Q8IWZ4 208 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 B4GALNT2Q8NHY0 566 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 SH3YL1Q96HL8 342 aaPredicted RBP14.78□□□□□ -0.04
MBD1-227ENST00000592060 CDCA4Q9BXL8 241 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 POLR2J3Q9H1A7 115 aaKnown RBP14.78□□□□□ -0.04
MBD1-227ENST00000592060 TCEAL2Q9H3H9 227 aaPredicted RBP14.78□□□□□ -0.04
MBD1-227ENST00000592060 AKIP1Q9NQ31 210 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 TMEM74BQ9NUR3 256 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 LIPT1Q9Y234 373 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 LOC105369274A0A096LPK9 316 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 LOC102723532A0A0G2JNH3 316 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 DNAJB6O75190 326 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 IGLV3-19P01714 112 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 MMP11P24347 488 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 TGFBR1P36897 503 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 RABIFP47224 123 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 RELAQ04206 551 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 OCA2Q04671 838 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 TARDBPQ13148 414 aaKnown RBP eCLIP14.78□□□□□ -0.04
MBD1-227ENST00000592060 DEFB134Q4QY38 66 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 HEPHL1Q6MZM0 1159 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 MFSD12Q6NUT3 480 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 Q6ZNX1 250 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 WDR53Q7Z5U6 358 aaPredicted RBP14.78□□□□□ -0.04
MBD1-227ENST00000592060 ZER1Q7Z7L7 766 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 OR4N4Q8N0Y3 316 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 LINC00471Q8N535 108 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 OR4K5Q8NGD3 323 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 C9orf43Q8TAL5 461 aaPredicted RBP14.78□□□□□ -0.04
MBD1-227ENST00000592060 LGALS12Q96DT0 336 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 CRELD1Q96HD1 420 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 MS4A4EQ96PG1 132 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 PRDM9Q9NQV7 894 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 POT1Q9NUX5 634 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 CALML5Q9NZT1 146 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 DAPP1Q9UN19 280 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 CHST2Q9Y4C5 530 aa14.78□□□□□ -0.04
MBD1-227ENST00000592060 UNC80Q8N2C7 3258 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 XIRP2A4UGR9 3374 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 hCG_2014768A0A024R1R8 64 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 FAM221BA6H8Z2 402 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 EFCAB9A8MZ26 197 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 B3GALT2O43825 422 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 ENTPD6O75354 484 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 NADKO95544 446 aaPredicted RBP14.77□□□□□ -0.04
MBD1-227ENST00000592060 TNFP01375 233 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 ALPPP05187 535 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 GADD45AP24522 165 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 IDUAP35475 653 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 SOX18P35713 384 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 NDUFA9Q16795 377 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 DGUOKQ16854 277 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 ZNF367Q7RTV3 350 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 VRK2Q86Y07 508 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 CAMKVQ8NCB2 501 aa14.77□□□□□ -0.04
MBD1-227ENST00000592060 RSC1A1Q92681 617 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms