RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 MRPL46Q9H2W6 279 aaKnown RBP9.53□□□□□ -0.88
VPS4B-207ENST00000591519 NOL11Q9H8H0 719 aaKnown RBP9.53□□□□□ -0.88
VPS4B-207ENST00000591519 AHSPQ9NZD4 102 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 TMEM216Q9P0N5 145 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 ZNF629Q9UEG4 869 aaPredicted RBP9.53□□□□□ -0.88
VPS4B-207ENST00000591519 FETUBQ9UGM5 382 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 TMCO1Q9UM00 188 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 A0A1W2PS29 197 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 A8MT66 165 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 STX16-NPEPL1H3BU86 382 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 STX16O14662 325 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 CDH16O75309 829 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 ZWINTO95229 277 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 IL2RAP01589 272 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 CT62P0C5K7 136 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 TSPAN8P19075 237 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 CDK9P50750 372 aaKnown RBP9.52□□□□□ -0.89
VPS4B-207ENST00000591519 XKP51811 444 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 ART1P52961 327 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 MAP4K2Q12851 820 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 DUSP8Q13202 625 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 MYBPHQ13203 477 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 RPS6KA2Q15349 733 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 SF3B4Q15427 424 aaKnown RBP eCLIP9.52□□□□□ -0.89
VPS4B-207ENST00000591519 FRG2Q64ET8 278 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 TMEM81Q6P7N7 255 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 EMBQ6PCB8 327 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 GALNT12Q8IXK2 581 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 PM20D2Q8IYS1 436 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 C4orf33Q8N1A6 199 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 OR52B6Q8NGF0 335 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 DIO2Q92813 273 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 CAVIN3Q969G5 261 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 ATP6V1E2Q96A05 226 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 ZNF597Q96LX8 424 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 FRG2BQ96QU4 278 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 FOXC2Q99958 501 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 PRDM14Q9GZV8 571 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 OR10A5Q9H207 317 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 C12orf65Q9H3J6 166 aaKnown RBP9.52□□□□□ -0.89
VPS4B-207ENST00000591519 ZBTB26Q9HCK0 441 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 TEX10Q9NXF1 929 aaPredicted RBP9.52□□□□□ -0.89
VPS4B-207ENST00000591519 DNAJB12Q9NXW2 375 aaKnown RBP9.52□□□□□ -0.89
VPS4B-207ENST00000591519 ZNF639Q9UID6 485 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 FOXD3Q9UJU5 478 aaPredicted RBP9.52□□□□□ -0.89
VPS4B-207ENST00000591519 CES1P1Q9UKY3 287 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 MTORP42345 2549 aa9.52□□□□□ -0.89
VPS4B-207ENST00000591519 DVL2O14641 736 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 OIP5O43482 229 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 GUCY1B2O75343 617 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 GBAP04062 536 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 PROCP04070 461 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 KLK1P06870 262 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 ABCB1P08183 1280 aaPredicted RBP9.51□□□□□ -0.89
VPS4B-207ENST00000591519 SBK3P0C264 359 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 CPMP14384 443 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 PORP16435 677 aaPredicted RBP9.51□□□□□ -0.89
VPS4B-207ENST00000591519 TAC1P20366 129 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 GDF1P27539 372 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 KIR2DL3P43628 341 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 TRPC1P48995 793 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 TMED10P49755 219 aaKnown RBP9.51□□□□□ -0.89
VPS4B-207ENST00000591519 IST1P53990 364 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 CDH13P55290 713 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 NRG3P56975 720 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 FBXW4P57775 412 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 RPP38P78345 283 aaKnown RBP9.51□□□□□ -0.89
VPS4B-207ENST00000591519 MGAT2Q10469 447 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 TRAF3Q13114 568 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 SNTA1Q13424 505 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 DAZAP2Q15038 168 aaPredicted RBP9.51□□□□□ -0.89
VPS4B-207ENST00000591519 KRTAP21-3Q3LHN1 58 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 GGTA1PQ4G0N0 100 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 ACSF3Q4G176 576 aaPredicted RBP9.51□□□□□ -0.89
VPS4B-207ENST00000591519 HLA-DQA1Q5Y7H0 255 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 NSUN5P2Q63ZY6 315 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 TIGD3Q6B0B8 471 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 TMEM64Q6YI46 380 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 PAGE2Q7Z2X7 111 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 WDR53Q7Z5U6 358 aaPredicted RBP9.51□□□□□ -0.89
VPS4B-207ENST00000591519 TMEM200AQ86VY9 491 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 LACC1Q8IV20 430 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 METTL4Q8N3J2 472 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 LIX1Q8N485 282 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 CCDC63Q8NA47 563 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 RELL2Q8NC24 303 aaPredicted RBP9.51□□□□□ -0.89
VPS4B-207ENST00000591519 NAXEQ8NCW5 288 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 FAM222BQ8WU58 562 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 RNASE6Q93091 150 aaKnown RBP9.51□□□□□ -0.89
VPS4B-207ENST00000591519 CTHRC1Q96CG8 243 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 TMEM41AQ96HV5 264 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 JSRP1Q96MG2 331 aaPredicted RBP9.51□□□□□ -0.89
VPS4B-207ENST00000591519 RILPQ96NA2 401 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 GNRHR2Q96P88 292 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 SH3GL2Q99962 352 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 CALHM2Q9HA72 323 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 RASSF1Q9NS23 344 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 PCTPQ9UKL6 214 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 PCDHA9Q9Y5H5 950 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 ITPR3Q14573 2671 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms