RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 CNTFP26441 200 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 BSGP35613 385 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 MC3RP41968 323 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 KCNJ5P48544 419 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 STARP49675 285 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 FAM27E3Q08E93 113 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 SNTA1Q13424 505 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 SLMAPQ14BN4 828 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 CPSF6Q16630 551 aaKnown RBP eCLIP13.83□□□□□ -0.2
ACTN4-211ENST00000589528 LIPJQ5W064 366 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 NUP54Q7Z3B4 507 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 ADGRE4PQ86SQ3 457 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 SLC35F6Q8N357 371 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 PYROXD1Q8WU10 500 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 OMA1Q96E52 524 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 SFXN2Q96NB2 322 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 WFIKKN1Q96NZ8 548 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 UCN2Q96RP3 112 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 RBBP8Q99708 897 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 BRINP2Q9C0B6 783 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 OR2B2Q9GZK3 357 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 NXF5Q9H1B4 397 aaKnown RBP13.83□□□□□ -0.2
ACTN4-211ENST00000589528 SMYD2Q9NRG4 433 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 DKKL1Q9UK85 242 aa13.83□□□□□ -0.2
ACTN4-211ENST00000589528 ZANQ9Y493 2812 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 COL6A5A8TX70 2615 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 A0A1W2PNV4 684 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 PRAMEF25A6NGN4 478 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 SYCE1LA8MT33 242 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 PLOD2O00469 737 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 KERAO60938 352 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 CNOT4O95628 575 aaKnown RBP13.82□□□□□ -0.2
ACTN4-211ENST00000589528 PORP16435 677 aaPredicted RBP13.82□□□□□ -0.2
ACTN4-211ENST00000589528 GP5P40197 560 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 CD79BP40259 229 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 XKP51811 444 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 CUL3Q13618 768 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 OR2A2Q6IF42 318 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 TMEM81Q6P7N7 255 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 CTAGE3PQ8IX95 158 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 ZC3HAV1LQ96H79 300 aaKnown RBP13.82□□□□□ -0.2
ACTN4-211ENST00000589528 UBXN10Q96LJ8 280 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 NODALQ96S42 347 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 SLC39A3Q9BRY0 314 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 ZNF717Q9BY31 904 aaPredicted RBP13.82□□□□□ -0.2
ACTN4-211ENST00000589528 EHD3Q9NZN3 535 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 DTX4Q9Y2E6 619 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 TSC22D4Q9Y3Q8 395 aa13.82□□□□□ -0.2
ACTN4-211ENST00000589528 ROS1P08922 2347 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 UQCRHLA0A096LP55 91 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 GOLGA6L10A6NI86 522 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 EFCAB8A8MWE9 144 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 DEFB108AA8MXU0 73 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 CXorf49A8MYA2 514 aaPredicted RBP13.81□□□□□ -0.2
ACTN4-211ENST00000589528 E7ESA3 106 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 H0YIV9 168 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 ACOX3O15254 700 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 SIAH2O43255 324 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 TNFSF13O75888 250 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 CRHP06850 196 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 LTA4HP09960 611 aaKnown RBP13.81□□□□□ -0.2
ACTN4-211ENST00000589528 GFAPP14136 432 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 CPMP14384 443 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 POU2F1P14859 743 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 CRYGSP22914 178 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 TCEA1P23193 301 aaKnown RBP13.81□□□□□ -0.2
ACTN4-211ENST00000589528 SSTR1P30872 391 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 SPRP35270 261 aaPredicted RBP13.81□□□□□ -0.2
ACTN4-211ENST00000589528 DEKP35659 375 aaKnown RBP13.81□□□□□ -0.2
ACTN4-211ENST00000589528 GFRA1P56159 465 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 ZKSCAN8Q15776 578 aaPredicted RBP13.81□□□□□ -0.2
ACTN4-211ENST00000589528 DESI1Q6ICB0 168 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 ISCA2Q86U28 154 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 ADCY4Q8NFM4 1077 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 HGDQ93099 445 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 TMCO6Q96DC7 493 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 PGM2Q96G03 612 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 LCORQ96JN0 433 aaPredicted RBP13.81□□□□□ -0.2
ACTN4-211ENST00000589528 ATOH8Q96SQ7 321 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 ITPAQ9BY32 194 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 DLGAP4Q9Y2H0 992 aa13.81□□□□□ -0.2
ACTN4-211ENST00000589528 USF3Q68DE3 2245 aa13.8□□□□□ -0.2
ACTN4-211ENST00000589528 RAI1Q7Z5J4 1906 aaPredicted RBP13.8□□□□□ -0.2
ACTN4-211ENST00000589528 SLC22A20A6NK97 555 aa13.8□□□□□ -0.2
ACTN4-211ENST00000589528 UGDHO60701 494 aa13.8□□□□□ -0.2
ACTN4-211ENST00000589528 UGT2B11O75310 529 aa13.8□□□□□ -0.2
ACTN4-211ENST00000589528 SRD5A2P31213 254 aa13.8□□□□□ -0.2
ACTN4-211ENST00000589528 GMPRP36959 345 aa13.8□□□□□ -0.2
ACTN4-211ENST00000589528 PTGDSP41222 190 aa13.8□□□□□ -0.2
ACTN4-211ENST00000589528 PTH2RP49190 550 aa13.8□□□□□ -0.2
ACTN4-211ENST00000589528 LHX2P50458 406 aa13.8□□□□□ -0.2
ACTN4-211ENST00000589528 SIRPAP78324 504 aa13.8□□□□□ -0.2
ACTN4-211ENST00000589528 EXOSC7Q15024 291 aaKnown RBP13.8□□□□□ -0.2
ACTN4-211ENST00000589528 VWA1Q6PCB0 445 aa13.8□□□□□ -0.2
ACTN4-211ENST00000589528 PLEKHM3Q6ZWE6 761 aa13.8□□□□□ -0.2
ACTN4-211ENST00000589528 PAGE2Q7Z2X7 111 aa13.8□□□□□ -0.2
ACTN4-211ENST00000589528 PLCZ1Q86YW0 608 aa13.8□□□□□ -0.2
ACTN4-211ENST00000589528 UBQLNLQ8IYU4 475 aa13.8□□□□□ -0.2
ACTN4-211ENST00000589528 WDSUB1Q8N9V3 476 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms