RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 A0A1W2PPV9 198 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 GSAPA4D1B5 854 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 PDZK1P1A8MUH7 402 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 M0R082 166 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 TMPRSS11DO60235 418 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 FHP07954 510 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 DBTP11182 482 aaKnown RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 BMP4P12644 408 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 ELAVL4P26378 380 aaKnown RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 DRD3P35462 400 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 OPRD1P41143 372 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 PSMD7P51665 324 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 LIM2P55344 173 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 TAS2R38P59533 333 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 COPZ1P61923 177 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 ALDH6A1Q02252 535 aaKnown RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 PRKCDQ05655 676 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 FOXD4Q12950 439 aaPredicted RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 SLAMF1Q13291 335 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 IRF3Q14653 427 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 AGBL4Q5VU57 503 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 CD300LDQ6UXZ3 194 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 PLEKHG7Q6ZR37 379 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 MMP21Q8N119 569 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 WDR36Q8NI36 951 aaKnown RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 SLC22A18Q96BI1 424 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 OTUB1Q96FW1 271 aaPredicted RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 DHRS1Q96LJ7 313 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 CEP19Q96LK0 163 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 TRNT1Q96Q11 434 aaKnown RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 SPOCK3Q9BQ16 436 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 MENTQ9BUN1 341 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 MND1Q9BWT6 205 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 OR51I1Q9H343 314 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 SP140LQ9H930 580 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 CPNE5Q9HCH3 593 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 SLAMF7Q9NQ25 335 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 TM7SF3Q9NS93 570 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 SIRT3Q9NTG7 399 aaPredicted RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 KLHL28Q9NXS3 571 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 SEC14L4Q9UDX3 406 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 NDOR1Q9UHB4 597 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 MOSPD1Q9UJG1 213 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 ACAD8Q9UKU7 415 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 LIPT1Q9Y234 373 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 ZNF780BQ9Y6R6 833 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 NOTCH4Q99466 2003 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 DSPPQ9NZW4 1301 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 TRBV4-1A0A0J9YWV2 114 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 AGAP5A6NIR3 686 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 DUXAA6NLW8 204 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 MAN2B1O00754 1011 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 TNFRSF10CO14798 259 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 ERI3O43414 337 aaKnown RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 ERAL1O75616 437 aaKnown RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 UPK1BO75841 260 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 TBX6O95947 436 aaPredicted RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 AGR2O95994 175 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 PTHP01270 115 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 FUCA1P04066 466 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 CSNK2A2P19784 350 aaPredicted RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 HIST1H1TP22492 207 aaPredicted RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 PSMB5P28074 263 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 SMSP52788 366 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 PRKAG1P54619 331 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 IRF4Q15306 451 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 PRSS53Q2L4Q9 553 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 UAP1L1Q3KQV9 507 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 KLHL22Q53GT1 634 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 TPRG1LQ5T0D9 272 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 SLX4IPQ5VYV7 408 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 RNLSQ5VYX0 342 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 FAM180BQ6P0A1 224 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 MFSD4AQ8N468 514 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 LINC01555Q8NAE3 123 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 FLCNQ8NFG4 579 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 OR2L5Q8NG80 312 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 OR2A1Q8NGT9 310 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 VANGL1Q8TAA9 524 aaPredicted RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 CREB3L4Q8TEY5 395 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 APOBEC4Q8WW27 367 aaKnown RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 IL4I1Q96RQ9 567 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 CDCA3Q99618 268 aaPredicted RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 CHCHD6Q9BRQ6 235 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 SLC17A9Q9BYT1 436 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 ROGDIQ9GZN7 287 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 NUAK2Q9H093 628 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 BTBD1Q9H0C5 482 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 GLIPR2Q9H4G4 154 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 FBRSQ9HAH7 460 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 TRNAU1APQ9NX07 287 aaKnown RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 TEX10Q9NXF1 929 aaPredicted RBP6.98□□□□□ -1.29
ZNF540-206ENST00000589117 ZNF229Q9UJW7 825 aa6.98□□□□□ -1.29
ZNF540-206ENST00000589117 PDE4DIPQ5VU43 2346 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 NUP210Q8TEM1 1887 aaPredicted RBP6.97□□□□□ -1.29
ZNF540-206ENST00000589117 METTL15A6NJ78 407 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 LOC110117498-PIK3R3F6TDL0 507 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 FFAR1O14842 300 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 LCMT2O60294 686 aaKnown RBP6.97□□□□□ -1.29
ZNF540-206ENST00000589117 APOA1P02647 267 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms