RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 TAMM41Q96BW9 452 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 SLC47A1Q96FL8 570 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 VN1R1Q9GZP7 353 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 AGPAT4Q9NRZ5 378 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 ZFHX2Q9C0A1 2572 aaPredicted RBP24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 TCRBV16S1A1N1A0A5B0 115 aa24.28■■□□□ 1.48
SCAMP4-210ENST00000588555 HRKO00198 91 aa24.28■■□□□ 1.48
SCAMP4-210ENST00000588555 TPST1O60507 370 aa24.28■■□□□ 1.48
SCAMP4-210ENST00000588555 PGM3O95394 542 aa24.28■■□□□ 1.48
SCAMP4-210ENST00000588555 MAP3K8P41279 467 aa24.28■■□□□ 1.48
SCAMP4-210ENST00000588555 ELOAQ14241 798 aaKnown RBP24.28■■□□□ 1.48
SCAMP4-210ENST00000588555 CYBRD1Q53TN4 286 aa24.28■■□□□ 1.48
SCAMP4-210ENST00000588555 RPS26P11Q5JNZ5 115 aaPredicted RBP24.28■■□□□ 1.48
SCAMP4-210ENST00000588555 ANKFN1Q8N957 763 aa24.28■■□□□ 1.48
SCAMP4-210ENST00000588555 SLC35A4Q96G79 324 aa24.28■■□□□ 1.48
SCAMP4-210ENST00000588555 C5orf58C9J3I9 102 aa24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 M0QX08 132 aa24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 MT-ND1P03886 318 aa24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 SEMG1P04279 462 aa24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 ACP2P11117 423 aa24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 TRIP6Q15654 476 aaKnown RBP24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 PATL1Q86TB9 770 aaKnown RBP24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 PRSS58Q8IYP2 241 aa24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 OR52R1Q8NGF1 315 aa24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 HOXB13Q92826 284 aaPredicted RBP24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 TREX2Q9BQ50 279 aaPredicted RBP24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 STRADBQ9C0K7 418 aa24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 RUBCNLQ9H714 662 aa24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 SLC39A1Q9NY26 324 aa24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 AKAP7Q9P0M2 348 aaPredicted RBP24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 LOXL2Q9Y4K0 774 aa24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 CFAP54Q96N23 3096 aa24.27■■□□□ 1.48
SCAMP4-210ENST00000588555 DUXAA6NLW8 204 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 MEN1O00255 615 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 SLC28A2O43868 658 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 OPN1SWP03999 348 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 IFNA16P05015 189 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 ZGLP1P0C6A0 271 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 ITIH1P19827 911 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 FUT7Q11130 342 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 LCN10Q6JVE6 187 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 HEPHL1Q6MZM0 1159 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 ZCCHC12Q6PEW1 402 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 OVCH1Q7RTY7 1134 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 VTCN1Q7Z7D3 282 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 ADAMTS15Q8TE58 950 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 PTPMT1Q8WUK0 201 aaPredicted RBP24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 HSH2DQ96JZ2 352 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 ZNF578Q96N58 590 aaPredicted RBP24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 MKL2Q9ULH7 1088 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 TMEM247A6NEH6 219 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 TMX2-CTNND1H3BSU7 103 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 CAPNS1P04632 268 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 CHRM4P08173 479 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 NR2F1P10589 423 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 ZNF267Q14586 743 aaPredicted RBP24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 TRIP10Q15642 601 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 DUSP5Q16690 384 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 CDRT4Q8N9R6 151 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 PLPP5Q8NEB5 264 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 LIN37Q96GY3 246 aaPredicted RBP24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 LRFN5Q96NI6 719 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 BCL2L10Q9HD36 194 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 C14orf105Q9NVL8 296 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 ADPRHL2Q9NX46 363 aa24.26■■□□□ 1.47
SCAMP4-210ENST00000588555 COQ9O75208 318 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 FCGR1AP12314 374 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 HOXB6P17509 224 aaKnown RBP24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 FASP25445 335 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 PEX2P28328 305 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 SSTR4P31391 388 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 VHLP40337 213 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 ETV5P41161 510 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 MAGEA2P43356 314 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 EMDP50402 254 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 FOXL2P58012 376 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 SELENOWP63302 87 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 OCA2Q04671 838 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 AMIGO2Q86SJ2 522 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 TMEM151BQ8IW70 566 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 C7orf57Q8NEG2 295 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 SLC9A6Q92581 669 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 SLC26A1Q9H2B4 701 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 PIGUQ9H490 435 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 AKIRIN1Q9H9L7 192 aaPredicted RBP24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 GIN1Q9NXP7 522 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 LIPT1Q9Y234 373 aa24.25■■□□□ 1.47
SCAMP4-210ENST00000588555 VSTM2BA6NLU5 285 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 SUV39H1O43463 412 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 CNOT3O75175 753 aaKnown RBP24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 CSO75390 466 aaKnown RBP24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 MT-CO3P00414 261 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 CLPSP04118 112 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 CRISP3P54108 245 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 NSDHLQ15738 373 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 OGFRL1Q5TC84 451 aaPredicted RBP24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 LPCAT4Q643R3 524 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 DHRS13Q6UX07 377 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 RAB11FIP2Q7L804 512 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 OLIG3Q7RTU3 272 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms