RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 PMP22Q01453 160 aa18.64■□□□□ 0.57
DDX39A-207ENST00000588542 CPTPQ5TA50 214 aa18.64■□□□□ 0.57
DDX39A-207ENST00000588542 EPGNQ6UW88 154 aa18.64■□□□□ 0.57
DDX39A-207ENST00000588542 TMEM64Q6YI46 380 aa18.64■□□□□ 0.57
DDX39A-207ENST00000588542 FAM47EQ6ZV65 393 aa18.64■□□□□ 0.57
DDX39A-207ENST00000588542 CAMKMTQ7Z624 323 aa18.64■□□□□ 0.57
DDX39A-207ENST00000588542 OR2L13Q8N349 312 aa18.64■□□□□ 0.57
DDX39A-207ENST00000588542 VSTM2LQ96N03 204 aa18.64■□□□□ 0.57
DDX39A-207ENST00000588542 RYDENQ9NUL5 291 aaKnown RBP18.64■□□□□ 0.57
DDX39A-207ENST00000588542 AIG1Q9NVV5 245 aa18.64■□□□□ 0.57
DDX39A-207ENST00000588542 NINQ8N4C6 2090 aa18.64■□□□□ 0.57
DDX39A-207ENST00000588542 ASPDHA6ND91 283 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 DDX5P17844 614 aaKnown RBP18.63■□□□□ 0.57
DDX39A-207ENST00000588542 PPICP45877 212 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 MLC1Q15049 377 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 NNATQ16517 81 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 HSP90B2PQ58FF3 399 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 ZNF324BQ6AW86 544 aaPredicted RBP18.63■□□□□ 0.57
DDX39A-207ENST00000588542 RTL4Q6ZR62 310 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 TAGAPQ8N103 731 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 GOLM1Q8NBJ4 401 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 PSD4Q8NDX1 1056 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 ZFP28Q8NHY6 868 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 SPACA9Q96E40 222 aaPredicted RBP18.63■□□□□ 0.57
DDX39A-207ENST00000588542 LCORQ96JN0 433 aaPredicted RBP18.63■□□□□ 0.57
DDX39A-207ENST00000588542 BTBD9Q96Q07 612 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 DPY30Q9C005 99 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 BHLHE41Q9C0J9 482 aaPredicted RBP18.63■□□□□ 0.57
DDX39A-207ENST00000588542 FOLH1BQ9HBA9 442 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 SH2D2AQ9NP31 389 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 TIMMDC1Q9NPL8 285 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 ATAD3AQ9NVI7 634 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 GPR55Q9Y2T6 319 aaPredicted RBP18.63■□□□□ 0.57
DDX39A-207ENST00000588542 NPFFR2Q9Y5X5 522 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 GPR45Q9Y5Y3 372 aa18.63■□□□□ 0.57
DDX39A-207ENST00000588542 RP1L1Q8IWN7 2480 aaPredicted RBP18.63■□□□□ 0.57
DDX39A-207ENST00000588542 A0A1W2PRB8 838 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 J3QKU1 62 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 TGDSO95455 350 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 CT45A8P0DMV1 189 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 CT45A9P0DMV2 189 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 DRD5P21918 477 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 ABCD3P28288 659 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 DCAF7P61962 342 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 SRSF11Q05519 484 aaKnown RBP18.62■□□□□ 0.57
DDX39A-207ENST00000588542 NTRK2Q16620 822 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 CT45A2Q5DJT8 189 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 TMEM198Q66K66 360 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 NXNQ6DKJ4 435 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 FAM180AQ6UWF9 173 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 NPSR1Q6W5P4 371 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.62■□□□□ 0.57
DDX39A-207ENST00000588542 SULF2Q8IWU5 870 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 PRR22Q8IZ63 422 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 FAR1Q8WVX9 515 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 HSPBAP1Q96EW2 488 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 MAGED4Q96JG8 741 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 SGCZQ96LD1 299 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 TEX37Q96LM6 180 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 PRPF18Q99633 342 aaKnown RBP18.62■□□□□ 0.57
DDX39A-207ENST00000588542 DUSP26Q9BV47 211 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 SIRT3Q9NTG7 399 aaPredicted RBP18.62■□□□□ 0.57
DDX39A-207ENST00000588542 DEPPQ9NTK1 212 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 DDX18Q9NVP1 670 aaKnown RBP18.62■□□□□ 0.57
DDX39A-207ENST00000588542 TAS2R9Q9NYW1 312 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 NTMQ9P121 344 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 MAPRE3Q9UPY8 281 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 KLF13Q9Y2Y9 288 aaPredicted RBP18.62■□□□□ 0.57
DDX39A-207ENST00000588542 ZGRF1Q86YA3 2104 aa18.62■□□□□ 0.57
DDX39A-207ENST00000588542 MYO18BQ8IUG5 2567 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 TO15178 435 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 ACOX3O15254 700 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 DIAPH2O60879 1101 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 COQ9O75208 318 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 ERN1O75460 977 aaKnown RBP18.61■□□□□ 0.57
DDX39A-207ENST00000588542 CCL3P10147 92 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 GPC1P35052 558 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 WNT3P56703 355 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 CORO7P57737 925 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 UFM1P61960 85 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 PHC1P78364 1004 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 PGS1Q32NB8 556 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 LSM12Q3MHD2 195 aaKnown RBP18.61■□□□□ 0.57
DDX39A-207ENST00000588542 DND1Q8IYX4 353 aaKnown RBP18.61■□□□□ 0.57
DDX39A-207ENST00000588542 CPSF7Q8N684 471 aaKnown RBP18.61■□□□□ 0.57
DDX39A-207ENST00000588542 ARFGAP2Q8N6H7 521 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 NATD1Q8N6N6 113 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 BCORP1Q8N888 145 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 CEP70Q8NHQ1 597 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 DNAJB8Q8NHS0 232 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 PAQR8Q8TEZ7 354 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 OR5P2Q8WZ92 322 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 TESCQ96BS2 214 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 FRMD6Q96NE9 622 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 CHCHD2Q9Y6H1 151 aaPredicted RBP18.61■□□□□ 0.57
DDX39A-207ENST00000588542 FLNCQ14315 2725 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 NCKAP5O14513 1909 aa18.61■□□□□ 0.57
DDX39A-207ENST00000588542 A0A0G2JMM0 328 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 A0A1W2PPB8 328 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 A0A1W2PRS3 328 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms