RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 PLTPP55058 493 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 EEF1A1P68104 462 aaKnown RBP12.79□□□□□ -0.36
DNMT1-213ENST00000587604 NKX6-1P78426 367 aaPredicted RBP12.79□□□□□ -0.36
DNMT1-213ENST00000587604 CAV1Q03135 178 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 MGAT2Q10469 447 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 MAP4K2Q12851 820 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 POU4F3Q15319 338 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 PRICKLE4Q2TBC4 344 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 CCNYL2Q5T2Q4 361 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 C10orf62Q5T681 223 aaPredicted RBP12.79□□□□□ -0.36
DNMT1-213ENST00000587604 MROH9Q5TGP6 573 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 EEF1A1P5Q5VTE0 462 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 SHEQ5VZ18 495 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 KLC3Q6P597 504 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 ENPP6Q6UWR7 440 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 PAGE2Q7Z2X7 111 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 KRTAP1-3Q8IUG1 177 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 VWA5B2Q8N398 1253 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 TRPC4APQ8TEL6 797 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 SLC44A1Q8WWI5 657 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 WNT2BQ93097 391 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 LCORQ96JN0 433 aaPredicted RBP12.79□□□□□ -0.36
DNMT1-213ENST00000587604 GPR78Q96P69 363 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 CDK15Q96Q40 435 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 NODALQ96S42 347 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 OSBPL11Q9BXB4 747 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 NOL11Q9H8H0 719 aaKnown RBP12.79□□□□□ -0.36
DNMT1-213ENST00000587604 GALNT8Q9NY28 637 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 CES1P1Q9UKY3 287 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 ROS1P08922 2347 aa12.79□□□□□ -0.36
DNMT1-213ENST00000587604 A0A096LPK6 155 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 A0A1W2PPR1 153 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 HMX2A2RU54 273 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 GOLGA6L10A6NI86 522 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 H0Y3Z8 333 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 OR7A17O14581 309 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 CASKO14936 926 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 GUCY1B2O75343 617 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 ATP1B1P05026 303 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 ARL1P40616 181 aaPredicted RBP12.78□□□□□ -0.36
DNMT1-213ENST00000587604 CPA2P48052 419 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 SRYQ05066 204 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 GAB1Q13480 694 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 NNATQ16517 81 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 FRG2Q64ET8 278 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 DESI1Q6ICB0 168 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 FAM111BQ6SJ93 734 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 SCIMPQ6UWF3 145 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 Q71RC1 249 aaPredicted RBP12.78□□□□□ -0.36
DNMT1-213ENST00000587604 LUZP2Q86TE4 346 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 CCDC25Q86WR0 208 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 TRIM42Q8IWZ5 723 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 WDSUB1Q8N9V3 476 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 SPATA4Q8NEY3 305 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 OR52B6Q8NGF0 335 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 OR14L1PQ8NHC6 308 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 ATP6V1E2Q96A05 226 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 INTS12Q96CB8 462 aaKnown RBP12.78□□□□□ -0.36
DNMT1-213ENST00000587604 OMA1Q96E52 524 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 FRG2BQ96QU4 278 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 NTMT1Q9BV86 223 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 MRPL1Q9BYD6 325 aaKnown RBP12.78□□□□□ -0.36
DNMT1-213ENST00000587604 BRINP2Q9C0B6 783 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 OR2B2Q9GZK3 357 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 ACBD3Q9H3P7 528 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 PIGMQ9H3S5 423 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 GALNT9Q9HCQ5 603 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 SERHLQ9NQF3 203 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 KLRF1Q9NZS2 232 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 CPSF2Q9P2I0 782 aaKnown RBP12.78□□□□□ -0.36
DNMT1-213ENST00000587604 NDRG3Q9UGV2 375 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 BCAP29Q9UHQ4 241 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 ZNF639Q9UID6 485 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 PCDHA9Q9Y5H5 950 aa12.78□□□□□ -0.36
DNMT1-213ENST00000587604 C1orf226A1L170 272 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 C2orf72A6NCS6 295 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 A8MXE2 369 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 ARHGEF9O43307 516 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 UGT2B11O75310 529 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 CSNK2A2P19784 350 aaPredicted RBP12.77□□□□□ -0.37
DNMT1-213ENST00000587604 DRD5P21918 477 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 CHMP24386 653 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 DEKP35659 375 aaKnown RBP12.77□□□□□ -0.37
DNMT1-213ENST00000587604 PPICP45877 212 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 CCNG1P51959 295 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 MAPK12P53778 367 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 GFRA1P56159 465 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 GUCY2DQ02846 1103 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 PLCXD2Q0VAA5 305 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 EXOSC7Q15024 291 aaKnown RBP12.77□□□□□ -0.37
DNMT1-213ENST00000587604 TTC19Q6DKK2 380 aaPredicted RBP12.77□□□□□ -0.37
DNMT1-213ENST00000587604 SLC48A1Q6P1K1 146 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 CLEC9AQ6UXN8 241 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 IFNEQ86WN2 208 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 CXorf67Q86X51 503 aaPredicted RBP12.77□□□□□ -0.37
DNMT1-213ENST00000587604 METTL4Q8N3J2 472 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 FBXO25Q8TCJ0 367 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 CTHRC1Q96CG8 243 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 G6PC3Q9BUM1 346 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 ITPAQ9BY32 194 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms