RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 HSPBAP1Q96EW2 488 aa16.24■□□□□ 0.19
TPM4-206ENST00000587201 APOPT1Q96IL0 206 aa16.24■□□□□ 0.19
TPM4-206ENST00000587201 RILPQ96NA2 401 aa16.24■□□□□ 0.19
TPM4-206ENST00000587201 MKS1Q9NXB0 559 aa16.24■□□□□ 0.19
TPM4-206ENST00000587201 QPCTLQ9NXS2 382 aa16.24■□□□□ 0.19
TPM4-206ENST00000587201 EHD3Q9NZN3 535 aa16.24■□□□□ 0.19
TPM4-206ENST00000587201 FIGNL2A6NMB9 653 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 ACOX3O15254 700 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 TRIM13O60858 407 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 TRIM3O75382 744 aaPredicted RBP16.23■□□□□ 0.19
TPM4-206ENST00000587201 PPM1BO75688 479 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 SNX4O95219 450 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 ABCB1P08183 1280 aaPredicted RBP16.23■□□□□ 0.19
TPM4-206ENST00000587201 SNRPB2P08579 225 aaKnown RBP16.23■□□□□ 0.19
TPM4-206ENST00000587201 COX6B1P14854 86 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 NAGAP17050 411 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 DDCP20711 480 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 GDF1P27539 372 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 MPIP34949 423 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 CASP3P42574 277 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 EMDP50402 254 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 PLCXD2Q0VAA5 305 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 WLSQ5T9L3 541 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 EMBQ6PCB8 327 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 PACS2Q86VP3 889 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 SRRM1Q8IYB3 904 aaKnown RBP16.23■□□□□ 0.19
TPM4-206ENST00000587201 FAM9CQ8IZT9 166 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 LIX1Q8N485 282 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 RPRMLQ8N4K4 120 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 BANPQ8N9N5 519 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 AENQ8WTP8 325 aaKnown RBP16.23■□□□□ 0.19
TPM4-206ENST00000587201 RND1Q92730 232 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 OMA1Q96E52 524 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 FAM111AQ96PZ2 611 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 BBS4Q96RK4 519 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 GATA5Q9BWX5 397 aaPredicted RBP16.23■□□□□ 0.19
TPM4-206ENST00000587201 ANGPTL4Q9BY76 406 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 ROPN1BQ9BZX4 212 aaPredicted RBP16.23■□□□□ 0.19
TPM4-206ENST00000587201 ANKRA2Q9H9E1 313 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 ROPN1Q9HAT0 212 aaPredicted RBP16.23■□□□□ 0.19
TPM4-206ENST00000587201 MIEF1Q9NQG6 463 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 SENP1Q9P0U3 644 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.23■□□□□ 0.19
TPM4-206ENST00000587201 FIS1Q9Y3D6 152 aa16.23■□□□□ 0.19
TPM4-206ENST00000587201 V9GYY5 206 aaPredicted RBP16.23■□□□□ 0.19
TPM4-206ENST00000587201 C19orf84I3L1E1 186 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 AZIN1O14977 448 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 SEC22BO75396 215 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 DRD5P21918 477 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 PPICP45877 212 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 TRPC1P48995 793 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 PMPCAQ10713 525 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 CEBPEQ15744 281 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 ERCC6LQ2NKX8 1250 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 WDR93Q6P2C0 686 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 NUP54Q7Z3B4 507 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 TICAM1Q8IUC6 712 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 MCEMP1Q8IX19 187 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 FAM76AQ8TAV0 307 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 ASB5Q8WWX0 329 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 ERP27Q96DN0 273 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 TRMOQ9BU70 441 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 SLC6A15Q9H2J7 730 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 METTL7AQ9H8H3 244 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 ACKR4Q9NPB9 350 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 ALKBH4Q9NXW9 302 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 SPRR3Q9UBC9 169 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 LGALS13Q9UHV8 139 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 RNF6Q9Y252 685 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 DNAJC13O75165 2243 aa16.22■□□□□ 0.19
TPM4-206ENST00000587201 FRG2CA6NGY1 282 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 SLC28A1O00337 649 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 RGS14O43566 566 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 SPAG7O75391 227 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 TRAPPC6AO75865 159 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 PRF1P14222 555 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 ENDOUP21128 410 aaKnown RBP16.21■□□□□ 0.19
TPM4-206ENST00000587201 ACVR2AP27037 513 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 ALDH3A1P30838 453 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 NUP107P57740 925 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 DESI1Q6ICB0 168 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 FAM71E1Q6IPT2 247 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 NOXRED1Q6NXP6 359 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 B3GNT6Q6ZMB0 384 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 ACAD11Q709F0 780 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 HGDQ93099 445 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 CAVIN3Q969G5 261 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 NODALQ96S42 347 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 MYNNQ9NPC7 610 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 WBP11Q9Y2W2 641 aaKnown RBP16.21■□□□□ 0.19
TPM4-206ENST00000587201 PTGDR2Q9Y5Y4 395 aa16.21■□□□□ 0.19
TPM4-206ENST00000587201 NINQ8N4C6 2090 aa16.2■□□□□ 0.18
TPM4-206ENST00000587201 CENPEQ02224 2701 aa16.2■□□□□ 0.18
TPM4-206ENST00000587201 GNB5O14775 395 aa16.2■□□□□ 0.18
TPM4-206ENST00000587201 TO15178 435 aa16.2■□□□□ 0.18
TPM4-206ENST00000587201 WDR1O75083 606 aa16.2■□□□□ 0.18
TPM4-206ENST00000587201 CHEK2O96017 543 aa16.2■□□□□ 0.18
TPM4-206ENST00000587201 CHRNB4P30926 498 aa16.2■□□□□ 0.18
TPM4-206ENST00000587201 NCBP2P52298 156 aaKnown RBP eCLIP16.2■□□□□ 0.18
TPM4-206ENST00000587201 TOMM20Q15388 145 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms