RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 ITPAQ9BY32 194 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 PAIP1Q9H074 479 aaKnown RBP12.64□□□□□ -0.39
VMP1-203ENST00000586245 CDCP1Q9H5V8 836 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 FOLH1BQ9HBA9 442 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 GPR83Q9NYM4 423 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 ABI3Q9P2A4 366 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 FAF1Q9UNN5 650 aaPredicted RBP12.64□□□□□ -0.39
VMP1-203ENST00000586245 ERVK-11Q9UQG0 969 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 LAMA5O15230 3695 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 ANKRD11Q6UB99 2663 aaPredicted RBP12.63□□□□□ -0.39
VMP1-203ENST00000586245 TTC36A6NLP5 189 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 CAPN14A8MX76 684 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 MKRN2OSH3BPM6 223 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 FBP2O00757 339 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 PRKNO60260 465 aaPredicted RBP12.63□□□□□ -0.39
VMP1-203ENST00000586245 PSMG1O95456 288 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 KRT75O95678 551 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 ITGB2P05107 769 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 HMGN2P05204 90 aaKnown RBP12.63□□□□□ -0.39
VMP1-203ENST00000586245 KRT16P08779 473 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 GAB1Q13480 694 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 RAPSNQ13702 412 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 MEP1AQ16819 746 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 CRB2Q5IJ48 1285 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 LRIF1Q5T3J3 769 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 AGAP7PQ5VUJ5 663 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 FCRLBQ6BAA4 426 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 TCTN3Q6NUS6 607 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 H3F3CQ6NXT2 135 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 ZCCHC12Q6PEW1 402 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 ANGPTL8Q6UXH0 198 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 C6orf120Q7Z4R8 191 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 RETREG3Q86VR2 466 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 RPS19BP1Q86WX3 136 aaKnown RBP12.63□□□□□ -0.39
VMP1-203ENST00000586245 CLEC4FQ8N1N0 589 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 DPP10Q8N608 796 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 FITM2Q8N6M3 262 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 CDRT4Q8N9R6 151 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 EXTL1Q92935 676 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 SLC35G5Q96KT7 338 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 AGAP4Q96P64 663 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 PHF12Q96QT6 1004 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 NPAS2Q99743 824 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 TRIM4Q9C037 500 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 PRORYQ9H606 182 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 GID8Q9NWU2 228 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 PCDHB14Q9Y5E9 798 aa12.63□□□□□ -0.39
VMP1-203ENST00000586245 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 WWP2O00308 870 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 ALPPP05187 535 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 PPIBP23284 216 aaKnown RBP12.62□□□□□ -0.39
VMP1-203ENST00000586245 PPICP45877 212 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 ANXA11P50995 505 aaKnown RBP12.62□□□□□ -0.39
VMP1-203ENST00000586245 NR0B1P51843 470 aaKnown RBP12.62□□□□□ -0.39
VMP1-203ENST00000586245 NRG3P56975 720 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 LASP1Q14847 261 aaKnown RBP12.62□□□□□ -0.39
VMP1-203ENST00000586245 KRT72Q14CN4 511 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 GTDC1Q4AE62 458 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 ABHD17BQ5VST6 288 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 SAXO2Q658L1 398 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 B3GNTL1Q67FW5 361 aaPredicted RBP12.62□□□□□ -0.39
VMP1-203ENST00000586245 MFSD12Q6NUT3 480 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 C19orf48Q6RUI8 117 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 TRPM8Q7Z2W7 1104 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 TAGAPQ8N103 731 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 LGI4Q8N135 537 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 C17orf47Q8NEP4 570 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 FDCSPQ8NFU4 85 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 SLC22A8Q8TCC7 542 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 PSMF1Q92530 271 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 SLC9A6Q92581 669 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 JADE3Q92613 823 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 TP53INP1Q96A56 240 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 RCN3Q96D15 328 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 NEURL3Q96EH8 262 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 GIMAP5Q96F15 307 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 CRELD1Q96HD1 420 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 LCORQ96JN0 433 aaPredicted RBP12.62□□□□□ -0.39
VMP1-203ENST00000586245 VSTM2LQ96N03 204 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 ARHGAP9Q9BRR9 750 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 YIPF4Q9BSR8 244 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 ACTRT3Q9BYD9 372 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 LIN28AQ9H9Z2 209 aaKnown RBP12.62□□□□□ -0.39
VMP1-203ENST00000586245 EFCAB1Q9HAE3 211 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 IL1RL2Q9HB29 575 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 SLC6A13Q9NSD5 602 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 SLAMF8Q9P0V8 285 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 MAP10Q9P2G4 905 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 MYOTQ9UBF9 498 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.62□□□□□ -0.39
VMP1-203ENST00000586245 TAGLN3Q9UI15 199 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 DTX4Q9Y2E6 619 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 YARS2Q9Y2Z4 477 aaKnown RBP12.62□□□□□ -0.39
VMP1-203ENST00000586245 ACACBO00763 2458 aa12.62□□□□□ -0.39
VMP1-203ENST00000586245 FRG2CA6NGY1 282 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 CLIC1O00299 241 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 AIM2O14862 343 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 ACOX3O15254 700 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 NME6O75414 186 aaPredicted RBP12.61□□□□□ -0.39
VMP1-203ENST00000586245 ITGA10O75578 1167 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms