RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 MROH9Q5TGP6 573 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 HLA-DQA1Q5Y7H0 255 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 TIGD3Q6B0B8 471 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 ANGPTL8Q6UXH0 198 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 RPS27LQ71UM5 84 aaKnown RBP10.59□□□□□ -0.71
LIG3-207ENST00000586119 LUZP2Q86TE4 346 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 PACS2Q86VP3 889 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 GSPT2Q8IYD1 628 aaKnown RBP10.59□□□□□ -0.71
LIG3-207ENST00000586119 DND1Q8IYX4 353 aaKnown RBP10.59□□□□□ -0.71
LIG3-207ENST00000586119 PLD6Q8N2A8 252 aaKnown RBP10.59□□□□□ -0.71
LIG3-207ENST00000586119 MREGQ8N565 214 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 C7orf57Q8NEG2 295 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 ADCY4Q8NFM4 1077 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 OR52B6Q8NGF0 335 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 MBD3L2Q8NHZ7 208 aaPredicted RBP10.59□□□□□ -0.71
LIG3-207ENST00000586119 HGDQ93099 445 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 TMEM41AQ96HV5 264 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 NSUN5Q96P11 429 aaKnown RBP10.59□□□□□ -0.71
LIG3-207ENST00000586119 TUBA1CQ9BQE3 449 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 PELOQ9BRX2 385 aaKnown RBP10.59□□□□□ -0.71
LIG3-207ENST00000586119 ITPAQ9BY32 194 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 NOL11Q9H8H0 719 aaKnown RBP10.59□□□□□ -0.71
LIG3-207ENST00000586119 PPCSQ9HAB8 311 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 SNX15Q9NRS6 342 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 CPSF2Q9P2I0 782 aaKnown RBP10.59□□□□□ -0.71
LIG3-207ENST00000586119 ACOT9Q9Y305 439 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 TSC22D4Q9Y3Q8 395 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 IKBKGQ9Y6K9 419 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 ABCA2Q9BZC7 2435 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 FN1P02751 2386 aaKnown RBP10.59□□□□□ -0.71
LIG3-207ENST00000586119 CCDC151A5D8V7 595 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 CLCA1A8K7I4 914 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 C17orf51A8MQB3 221 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 ICOSLGO75144 302 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 TMIGD3P0DMS9 266 aaPredicted RBP10.58□□□□□ -0.72
LIG3-207ENST00000586119 DRD2P14416 443 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 FOSL1P15407 271 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 CD53P19397 219 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 TCEA1P23193 301 aaKnown RBP10.58□□□□□ -0.72
LIG3-207ENST00000586119 CNTFP26441 200 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 FEN1P39748 380 aaKnown RBP10.58□□□□□ -0.72
LIG3-207ENST00000586119 PCBP2Q15366 365 aaKnown RBP eCLIP10.58□□□□□ -0.72
LIG3-207ENST00000586119 SGO1Q5FBB7 561 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 OR52E8Q6IFG1 317 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 CAMKMTQ7Z624 323 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 GALNT12Q8IXK2 581 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 PM20D2Q8IYS1 436 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 WDSUB1Q8N9V3 476 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 L3MBTL4Q8NA19 623 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 OR4K14Q8NGD5 310 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 OR1J4Q8NGS1 313 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 INTS12Q96CB8 462 aaKnown RBP10.58□□□□□ -0.72
LIG3-207ENST00000586119 HSPBAP1Q96EW2 488 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 CENPKQ9BS16 269 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 G6PC3Q9BUM1 346 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 RBM24Q9BX46 236 aaKnown RBP10.58□□□□□ -0.72
LIG3-207ENST00000586119 MRPL1Q9BYD6 325 aaKnown RBP10.58□□□□□ -0.72
LIG3-207ENST00000586119 ANKRA2Q9H9E1 313 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 CALHM2Q9HA72 323 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 WDR41Q9HAD4 459 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 SERHLQ9NQF3 203 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 FARSBQ9NSD9 589 aaKnown RBP10.58□□□□□ -0.72
LIG3-207ENST00000586119 BCAP29Q9UHQ4 241 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 FOXD3Q9UJU5 478 aaPredicted RBP10.58□□□□□ -0.72
LIG3-207ENST00000586119 CES1P1Q9UKY3 287 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 MAPRE3Q9UPY8 281 aa10.58□□□□□ -0.72
LIG3-207ENST00000586119 CAPN14A8MX76 684 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 B4DXG7 233 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 FOXE1O00358 373 aaPredicted RBP10.57□□□□□ -0.72
LIG3-207ENST00000586119 PPP6CO00743 305 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 UGT2B11O75310 529 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 PPM1BO75688 479 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 CPMP14384 443 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 OPRM1P35372 400 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 PEX19P40855 299 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 SERPINB9P50453 376 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 ARFIP1P53367 373 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 ALDH18A1P54886 795 aaKnown RBP10.57□□□□□ -0.72
LIG3-207ENST00000586119 DCAF7P61962 342 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 SLC29A2Q14542 456 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 LTB4RQ15722 352 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 PRICKLE4Q2TBC4 344 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 TRMT12Q53H54 448 aaKnown RBP10.57□□□□□ -0.72
LIG3-207ENST00000586119 LGSNQ5TDP6 509 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 TAOK1Q7L7X3 1001 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 NUDT13Q86X67 352 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 KIF18BQ86Y91 864 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 TRIM42Q8IWZ5 723 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 GCNT2Q8N0V5 402 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 CIARTQ8N365 385 aaPredicted RBP10.57□□□□□ -0.72
LIG3-207ENST00000586119 RHEBL1Q8TAI7 183 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 UBLCP1Q8WVY7 318 aaPredicted RBP10.57□□□□□ -0.72
LIG3-207ENST00000586119 OMA1Q96E52 524 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 PHF21BQ96EK2 531 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 LRRC46Q96FV0 321 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 YIPF4Q9BSR8 244 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 BRINP2Q9C0B6 783 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 METTL7AQ9H8H3 244 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 ZBTB26Q9HCK0 441 aa10.57□□□□□ -0.72
LIG3-207ENST00000586119 GALNT8Q9NY28 637 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms