RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TLX3O43711 291 aaPredicted RBP9.74□□□□□ -0.85
LIG3-203ENST00000585370 SLC28A2O43868 658 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 PLOD3O60568 738 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 PRKRAO75569 313 aaKnown RBP9.74□□□□□ -0.85
LIG3-203ENST00000585370 C1QCP02747 245 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 MT-ND1P03886 318 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 ATP1B1P05026 303 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 SLC35E2P0CK97 266 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 GIMD1P0DJR0 217 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 C8orf89P0DMQ9 161 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 NR2F1P10589 423 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 ACP1P24666 158 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 ITPKBP27987 946 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 EIF2S3P41091 472 aaKnown RBP9.74□□□□□ -0.85
LIG3-203ENST00000585370 RPS6KA3P51812 740 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 RAD23AP54725 363 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 ITGA1P56199 1179 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 OR1D5P58170 312 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 MERTKQ12866 999 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 ILKQ13418 452 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 BLMHQ13867 455 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 PROX2Q3B8N5 592 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 TTC23Q5W5X9 447 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 FAM180BQ6P0A1 224 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 TNFAIP8L2Q6P589 184 aaPredicted RBP9.74□□□□□ -0.85
LIG3-203ENST00000585370 APLFQ8IW19 511 aaPredicted RBP9.74□□□□□ -0.85
LIG3-203ENST00000585370 ZNF595Q8IYB9 648 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 OR2L13Q8N349 312 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 D2HGDHQ8N465 521 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 ZNF675Q8TD23 568 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 NAT6Q93015 286 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 FKBP10Q96AY3 582 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 TAMM41Q96BW9 452 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 C7orf34Q96L11 122 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 DCBLD2Q96PD2 775 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 MS4A4EQ96PG1 132 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 TRNT1Q96Q11 434 aaKnown RBP9.74□□□□□ -0.85
LIG3-203ENST00000585370 EPYCQ99645 322 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 PELOQ9BRX2 385 aaKnown RBP9.74□□□□□ -0.85
LIG3-203ENST00000585370 ANKRD60Q9BZ19 345 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 NRSN2Q9GZP1 204 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 GABARAPL1Q9H0R8 117 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 RUBCNLQ9H714 662 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 REEP1Q9H902 201 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 GIN1Q9NXP7 522 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 PDP2Q9P2J9 529 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 SERTAD3Q9UJW9 196 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 CDC14AQ9UNH5 594 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 C19orf53Q9UNZ5 99 aaPredicted RBP9.74□□□□□ -0.85
LIG3-203ENST00000585370 FAM32AQ9Y421 112 aaKnown RBP9.74□□□□□ -0.85
LIG3-203ENST00000585370 AK5Q9Y6K8 562 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 FLNBO75369 2602 aaKnown RBP9.73□□□□□ -0.85
LIG3-203ENST00000585370 SYNDIG1LA6NDD5 238 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 TTC36A6NLP5 189 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 WASHC1A8K0Z3 465 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 A8MVJ9 347 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 SGK494L7N484 410 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 PDLIM1O00151 329 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 EI24O14681 340 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 FOXS1O43638 330 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 KIF1CO43896 1103 aaKnown RBP9.73□□□□□ -0.85
LIG3-203ENST00000585370 B4GALT2O60909 372 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 CTNSO60931 367 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 MFN2O95140 757 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 AK1P00568 194 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 ALBP02768 609 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 ALPLP05186 524 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 HMGN2P05204 90 aaKnown RBP9.73□□□□□ -0.85
LIG3-203ENST00000585370 BCHEP06276 602 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 LYNP07948 512 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 OR12D1P0DN82 309 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 RHCEP18577 417 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 CDH2P19022 906 aaPredicted RBP9.73□□□□□ -0.85
LIG3-203ENST00000585370 CD1CP29017 333 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 AQP1P29972 269 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 GALNSP34059 522 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 CAPGP40121 348 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 DCTP40126 519 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 DUSP3P51452 185 aaPredicted RBP9.73□□□□□ -0.85
LIG3-203ENST00000585370 PRKAG1P54619 331 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 CASP9P55211 416 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 GFERP55789 205 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 SMIM11AP58511 58 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 INSM1Q01101 510 aaPredicted RBP9.73□□□□□ -0.85
LIG3-203ENST00000585370 RTP5Q14D33 572 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 SLC36A3Q495N2 470 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 C6orf52Q5T4I8 152 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 CDC73Q6P1J9 531 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 TMEM71Q6P5X7 295 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 TMEM107Q6UX40 140 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 SZRD1Q7Z422 152 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 VTCN1Q7Z7D3 282 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 CACTIN-AS1Q8N1I8 211 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 OR9A2Q8NGT5 310 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 SPPL2AQ8TCT8 520 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 MAGEE2Q8TD90 523 aaPredicted RBP9.73□□□□□ -0.85
LIG3-203ENST00000585370 ADAMTS15Q8TE58 950 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 NR4A3Q92570 626 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 PROX1Q92786 737 aa9.73□□□□□ -0.85
LIG3-203ENST00000585370 NXPE2Q96DL1 559 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms