RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 RGS14O43566 566 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 FGF17O60258 216 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 CTNSO60931 367 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 ATP6AP2O75787 350 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 LRATO95237 230 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 IGHG3P01860 377 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 GLI4P10075 376 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 PIGAP37287 484 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 RPL14P50914 215 aaKnown RBP14.42□□□□□ -0.1
SKA2-209ENST00000583976 MAPK12P53778 367 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 DLX5P56178 289 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 RAE1P78406 368 aaKnown RBP14.42□□□□□ -0.1
SKA2-209ENST00000583976 STX4Q12846 297 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 PDCD2Q16342 344 aaPredicted RBP14.42□□□□□ -0.1
SKA2-209ENST00000583976 SPIN4Q56A73 249 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 PRAMEF20Q5VT98 475 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 Q6ZSR9 355 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 FAM47EQ6ZV65 393 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 LIX1LQ8IVB5 337 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 OR4N5Q8IXE1 308 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 C9orf40Q8IXQ3 194 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 MORN4Q8NDC4 146 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 ZNF721Q8TF20 911 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 DAZLQ92904 295 aaKnown RBP14.42□□□□□ -0.1
SKA2-209ENST00000583976 ANKRD9Q96BM1 317 aaPredicted RBP14.42□□□□□ -0.1
SKA2-209ENST00000583976 FAM173AQ9BQD7 235 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 TTYH2Q9BSA4 534 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 CNPPD1Q9BV87 410 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 THAP1Q9NVV9 213 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 LYARQ9NX58 379 aaKnown RBP14.42□□□□□ -0.1
SKA2-209ENST00000583976 TEX10Q9NXF1 929 aaPredicted RBP14.42□□□□□ -0.1
SKA2-209ENST00000583976 MS4A12Q9NXJ0 267 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 VTI1BQ9UEU0 232 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 Q9UFV3 132 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 PHF11Q9UIL8 331 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 ADAM29Q9UKF5 820 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 CCL27Q9Y4X3 112 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 GNG14A0A1W2PPG7 69 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 A0A1W2PR48 441 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 DYNC1I1O14576 645 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 PROM1O43490 865 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 PCDH7O60245 1069 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 SEC22BO75396 215 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 RSL1D1O76021 490 aaKnown RBP14.41□□□□□ -0.1
SKA2-209ENST00000583976 HOXD4P09016 255 aaPredicted RBP14.41□□□□□ -0.1
SKA2-209ENST00000583976 KITP10721 976 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 TNNI3P19429 210 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 BUD31P41223 144 aaPredicted RBP14.41□□□□□ -0.1
SKA2-209ENST00000583976 GALNTL6Q49A17 601 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 NDUFAF5Q5TEU4 345 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 B3GNT6Q6ZMB0 384 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 ACAD11Q709F0 780 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 GOLM1Q8NBJ4 401 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 OR10Q1Q8NGQ4 319 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 RAB3IL1Q8TBN0 382 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 LRRC8CQ8TDW0 803 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 C3orf30Q96M34 536 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 RPF2Q9H7B2 306 aaKnown RBP14.41□□□□□ -0.1
SKA2-209ENST00000583976 ZNF703Q9H7S9 590 aaPredicted RBP14.41□□□□□ -0.1
SKA2-209ENST00000583976 IL1RL2Q9HB29 575 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 SACM1LQ9NTJ5 587 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 MARCOQ9UEW3 520 aaPredicted RBP14.41□□□□□ -0.1
SKA2-209ENST00000583976 GIMAP2Q9UG22 337 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.41□□□□□ -0.1
SKA2-209ENST00000583976 L3MBTL1Q9Y468 752 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 POLR3HQ9Y535 204 aaPredicted RBP14.41□□□□□ -0.1
SKA2-209ENST00000583976 VPS13CQ709C8 3753 aa14.41□□□□□ -0.1
SKA2-209ENST00000583976 LRRC3CA6NJW4 275 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 AQP7O14520 342 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 BCKDKO14874 412 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 SNNO75324 88 aaPredicted RBP14.4□□□□□ -0.1
SKA2-209ENST00000583976 SNUPNO95149 360 aaKnown RBP14.4□□□□□ -0.1
SKA2-209ENST00000583976 NADKO95544 446 aaPredicted RBP14.4□□□□□ -0.1
SKA2-209ENST00000583976 AIFM1O95831 613 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 JUNP05412 331 aaKnown RBP14.4□□□□□ -0.1
SKA2-209ENST00000583976 CNR1P21554 472 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 TLX1P31314 330 aaPredicted RBP14.4□□□□□ -0.1
SKA2-209ENST00000583976 TIA1P31483 386 aaKnown RBP eCLIP14.4□□□□□ -0.15e-7■■□□□ 11.7
SKA2-209ENST00000583976 DNAJA1P31689 397 aaKnown RBP14.4□□□□□ -0.1
SKA2-209ENST00000583976 TNFRSF17Q02223 184 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 C1orf185Q5T7R7 199 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 PAOXQ6QHF9 649 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 LYPD8Q6UX82 237 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 MMP21Q8N119 569 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 CDC26Q8NHZ8 85 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 TM4SF18Q96CE8 201 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 SLC6A15Q9H2J7 730 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 LRTM1Q9HBL6 345 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 MED4Q9NPJ6 270 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 C1orf109Q9NX04 203 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 KCNN3Q9UGI6 736 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 MCM8Q9UJA3 840 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 ARHGAP21Q5T5U3 1957 aa14.4□□□□□ -0.1
SKA2-209ENST00000583976 A0A1B0GVC2 190 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 OR14I1A6ND48 311 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 KDM4EB2RXH2 506 aaPredicted RBP14.39□□□□□ -0.11
SKA2-209ENST00000583976 LSM1O15116 133 aaKnown RBP14.39□□□□□ -0.11
SKA2-209ENST00000583976 PGRMC2O15173 223 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 PEX11AO75192 247 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 P04436 131 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms