RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 SPATA9Q9BWV2 254 aa12.6□□□□□ -0.39
CSNK1D-220ENST00000581737 BHLHE41Q9C0J9 482 aaPredicted RBP12.6□□□□□ -0.39
CSNK1D-220ENST00000581737 ZNF700Q9H0M5 742 aa12.6□□□□□ -0.39
CSNK1D-220ENST00000581737 REEP4Q9H6H4 257 aa12.6□□□□□ -0.39
CSNK1D-220ENST00000581737 NANOGQ9H9S0 305 aa12.6□□□□□ -0.39
CSNK1D-220ENST00000581737 MIEF1Q9NQG6 463 aa12.6□□□□□ -0.39
CSNK1D-220ENST00000581737 EHD3Q9NZN3 535 aa12.6□□□□□ -0.39
CSNK1D-220ENST00000581737 BTNL2Q9UIR0 455 aa12.6□□□□□ -0.39
CSNK1D-220ENST00000581737 TUBD1Q9UJT1 453 aa12.6□□□□□ -0.39
CSNK1D-220ENST00000581737 ANAPC2Q9UJX6 822 aa12.6□□□□□ -0.39
CSNK1D-220ENST00000581737 FBXL4Q9UKA2 621 aa12.6□□□□□ -0.39
CSNK1D-220ENST00000581737 NOTCH2Q04721 2471 aa12.6□□□□□ -0.39
CSNK1D-220ENST00000581737 ASPDHA6ND91 283 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 ACOT8O14734 319 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 DYRK3O43781 588 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 GPR75O95800 540 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 IL3P08700 152 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 RNF224P0DH78 156 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 ICAM2P13598 275 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 UQCRFS1P47985 274 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 ALDH9A1P49189 494 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 GSK3BP49841 420 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 MLLT10P55197 1068 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 BTG2P78543 158 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 MRPS22P82650 360 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 PLIN5Q00G26 463 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 EEF1A2Q05639 463 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 SFT2D3Q587I9 215 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 DCAF10Q5QP82 559 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 SLC48A1Q6P1K1 146 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 ERICH5Q6P6B1 374 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 LANCL3Q6ZV70 420 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 NDUFAF7Q7L592 441 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 APLFQ8IW19 511 aaPredicted RBP12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 RIMKLAQ8IXN7 391 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 PQLC1Q8N2U9 271 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 KRTCAP2Q8N6L1 136 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 TMEM52Q8NDY8 209 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 C9orf43Q8TAL5 461 aaPredicted RBP12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 PYDC1Q8WXC3 89 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 GTF2H4Q92759 462 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 C8orf44Q96CB5 159 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 PPCDCQ96CD2 204 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 DUS3LQ96G46 650 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 NSMCE2Q96MF7 247 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 PANX1Q96RD7 426 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 SLC39A3Q9BRY0 314 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 THUMPD3Q9BV44 507 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 ADAP2Q9NPF8 381 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 NECTIN3Q9NQS3 549 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 GIMAP4Q9NUV9 329 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 CMTM6Q9NX76 183 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 ATP6V1HQ9UI12 483 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 VPS4AQ9UN37 437 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 C15orf41Q9Y2V0 281 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 CROCCQ5TZA2 2017 aa12.59□□□□□ -0.39
CSNK1D-220ENST00000581737 NBASA2RRP1 2371 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 IGHV1-45A0A0A0MS14 117 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 PRSS51A0A1B0GVH4 220 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 OR2W5A6NFC9 320 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 ARGFXA6NJG6 315 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 FAM220BPB1ANY3 271 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 AKAP10O43572 662 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 FGF17O60258 216 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 COX6A1P12074 109 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 SLC7A1P30825 629 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 EFNA3P52797 238 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 IGLV3-21P80748 117 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 FOLH1Q04609 750 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 AIMP2Q13155 320 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 ELAVL1Q15717 326 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 EXT1Q16394 746 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 PAPD4Q6PIY7 484 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 DLEU7Q6UYE1 221 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 TMEM151BQ8IW70 566 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 SHISA5Q8N114 240 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 OR2T12Q8NG77 320 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 OR4K14Q8NGD5 310 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 FAM120BQ96EK7 910 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 ZNF764Q96H86 408 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 CCDC115Q96NT0 180 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 DGAT2Q96PD7 388 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 TACO1Q9BSH4 297 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 ALOXE3Q9BYJ1 711 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 ATP13A2Q9NQ11 1180 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 C8orf4Q9NR00 106 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 NKX1-2Q9UD57 310 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 KCNMB2Q9Y691 235 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 ZNF780BQ9Y6R6 833 aa12.58□□□□□ -0.4
CSNK1D-220ENST00000581737 TCRBV3S1A0A5B6 114 aa12.57□□□□□ -0.4
CSNK1D-220ENST00000581737 SAGE2PA6NJ88 616 aa12.57□□□□□ -0.4
CSNK1D-220ENST00000581737 GLOD5A6NK44 160 aa12.57□□□□□ -0.4
CSNK1D-220ENST00000581737 RNASET2O00584 256 aaKnown RBP12.57□□□□□ -0.4
CSNK1D-220ENST00000581737 ARPC2O15144 300 aa12.57□□□□□ -0.4
CSNK1D-220ENST00000581737 HNRNPRO43390 633 aaKnown RBP12.57□□□□□ -0.4
CSNK1D-220ENST00000581737 PEX1O43933 1283 aa12.57□□□□□ -0.4
CSNK1D-220ENST00000581737 OR10H2O60403 315 aa12.57□□□□□ -0.4
CSNK1D-220ENST00000581737 TBX19O60806 448 aa12.57□□□□□ -0.4
CSNK1D-220ENST00000581737 LDB3O75112 727 aa12.57□□□□□ -0.4
CSNK1D-220ENST00000581737 PRKRAO75569 313 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 225.9 ms