RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 NCLNQ969V3 563 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 NEURL3Q96EH8 262 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 GIMAP5Q96F15 307 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 VSTM2LQ96N03 204 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 BTBD9Q96Q07 612 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 LMF2Q9BU23 707 aaKnown RBP9.66□□□□□ -0.86
CCDC47-203ENST00000580986 LHPPQ9H008 270 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 PAIP1Q9H074 479 aaKnown RBP9.66□□□□□ -0.86
CCDC47-203ENST00000580986 ING2Q9H160 280 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 OR10A5Q9H207 317 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 EPS8L2Q9H6S3 715 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 EFCAB1Q9HAE3 211 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 ZNF160Q9HCG1 818 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 ZCCHC3Q9NUD5 404 aaKnown RBP9.66□□□□□ -0.86
CCDC47-203ENST00000580986 ZNF223Q9UK11 482 aaPredicted RBP9.66□□□□□ -0.86
CCDC47-203ENST00000580986 CORO2BQ9UQ03 480 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 HEMK1Q9Y5R4 338 aaPredicted RBP9.66□□□□□ -0.86
CCDC47-203ENST00000580986 KCNMB2Q9Y691 235 aa9.66□□□□□ -0.86
CCDC47-203ENST00000580986 C15orf38-AP3S2A0A0A6YYH1 394 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 RNF103-CHMP3A0A140T963 221 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 FRG2CA6NGY1 282 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 DUXAA6NLW8 204 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 A8MUA0 341 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 HRKO00198 91 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 FBP2O00757 339 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 TO15178 435 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 ACOX3O15254 700 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 ASNA1O43681 348 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 KRT75O95678 551 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 AGR2O95994 175 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 ABCB1P08183 1280 aaPredicted RBP9.65□□□□□ -0.86
CCDC47-203ENST00000580986 PRKAR1AP10644 381 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 DRD5P21918 477 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 SSTR4P31391 388 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 PPICP45877 212 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 PRIM2P49643 509 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 ANXA11P50995 505 aaKnown RBP9.65□□□□□ -0.86
CCDC47-203ENST00000580986 RNF4P78317 190 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 Q0VFX4 171 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 FADDQ13158 208 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 DUSP8Q13202 625 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 GAB1Q13480 694 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 MMEL1Q495T6 779 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 C6orf10Q5SRN2 563 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 AP1ARQ63HQ0 302 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 REP15Q6BDI9 236 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 MFSD12Q6NUT3 480 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 SLC2A7Q6PXP3 512 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 ARPINQ7Z6K5 226 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 RETREG3Q86VR2 466 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 C9orf40Q8IXQ3 194 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 DND1Q8IYX4 353 aaKnown RBP9.65□□□□□ -0.86
CCDC47-203ENST00000580986 SLC15A4Q8N697 577 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 ZNF441Q8N8Z8 693 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 NUP43Q8NFH3 380 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 OR52R1Q8NGF1 315 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 ZFP90Q8TF47 636 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 APOBEC4Q8WW27 367 aaKnown RBP9.65□□□□□ -0.86
CCDC47-203ENST00000580986 PSMF1Q92530 271 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 KAT2AQ92830 837 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 ADIPOR1Q96A54 375 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 STACQ99469 402 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 SLC35A5Q9BS91 424 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 INPP5KQ9BT40 448 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 NUDT9Q9BW91 350 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 WWTR1Q9GZV5 400 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 RAD21L1Q9H4I0 556 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 DUSP22Q9NRW4 184 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 GPATCH2Q9NW75 528 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 GID8Q9NWU2 228 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 THUMPD1Q9NXG2 353 aaKnown RBP9.65□□□□□ -0.86
CCDC47-203ENST00000580986 NDE1Q9NXR1 346 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 MAP10Q9P2G4 905 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 TAGLN3Q9UI15 199 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 TEKT2Q9UIF3 430 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 AP3M1Q9Y2T2 418 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 PCDHB14Q9Y5E9 798 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 PCDHGB7Q9Y5F8 929 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 PCDHGA9Q9Y5G4 932 aaKnown RBP9.65□□□□□ -0.86
CCDC47-203ENST00000580986 CPAMD8Q8IZJ3 1885 aa9.65□□□□□ -0.86
CCDC47-203ENST00000580986 LAMA5O15230 3695 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 PTPRQQ9UMZ3 2332 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 TRBV11-1A0A0K0K1C0 115 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 MYOCOSA0A1B0GUC4 107 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 TMEM200CA6NKL6 621 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 FXYD1O00168 92 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 MRASO14807 208 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 NKX2-2O95096 273 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 ANP32DO95626 131 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 AK1P00568 194 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 HMGN2P05204 90 aaKnown RBP9.64□□□□□ -0.87
CCDC47-203ENST00000580986 GUSBP08236 651 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 BMP2P12643 396 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 CD1EP15812 388 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 NAGAP17050 411 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 CALB2P22676 271 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 ITPKBP27987 946 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 SOX11P35716 441 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 CDKN2CP42773 168 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 CBX1P83916 185 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms