RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 G3V2L1 256 aa19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 UBFD1O14562 309 aaKnown RBP19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 PPM1BO75688 479 aa19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 TRAPPC6AO75865 159 aa19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 SHBGP04278 402 aa19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 ENO1P06733 434 aaKnown RBP19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 PCSK2P16519 638 aa19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 KRT15P19012 456 aa19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 ADH7P40394 386 aa19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 FOXA1P55317 472 aa19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 ACSM2AQ08AH3 577 aa19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 ACSM2BQ68CK6 577 aa19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 SH2D5Q6ZV89 423 aa19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 LIX1LQ8IVB5 337 aa19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 LCORQ96JN0 433 aaPredicted RBP19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 ANKRA2Q9H9E1 313 aa19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 MID1IP1Q9NPA3 183 aa19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 PFDN4Q9NQP4 134 aa19.49■□□□□ 0.71
CSNK1D-215ENST00000580784 C15orf38-AP3S2A0A0A6YYH1 394 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 HOXD4P09016 255 aaPredicted RBP19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 DRD2P14416 443 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 GABRA1P14867 456 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 NAGAP17050 411 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 ELAVL4P26378 380 aaKnown RBP19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 MSX1P28360 303 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 ZFP36L2P47974 494 aaKnown RBP19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 MASP1P48740 699 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 EMDP50402 254 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 RPP38P78345 283 aaKnown RBP19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 TLE4Q04727 773 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 SPIN4Q56A73 249 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 ULK2Q8IYT8 1036 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 C16orf78Q8WTQ4 265 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 HGDQ93099 445 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 EXOSC8Q96B26 276 aaKnown RBP19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 NTNG2Q96CW9 530 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 OMA1Q96E52 524 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 HSPBAP1Q96EW2 488 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 EBPLQ9BY08 206 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 UBQLN3Q9H347 655 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 MED12Q93074 2177 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 CCDC168Q8NDH2 2452 aa19.48■□□□□ 0.71
CSNK1D-215ENST00000580784 C2orf72A6NCS6 295 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 GNB5O14775 395 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 GLRA3O75311 464 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 PROCP04070 461 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 HPNP05981 417 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 MYL2P10916 166 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 DRD5P21918 477 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 TIA1P31483 386 aaKnown RBP eCLIP19.47■□□□□ 0.715e-7■□□□□ 10.1
CSNK1D-215ENST00000580784 PPICP45877 212 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 SLCO1A2P46721 670 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 CDK9P50750 372 aaKnown RBP19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 ZNF628Q5EBL2 1059 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 ZYG11AQ6WRX3 759 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 NUP54Q7Z3B4 507 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 UBLCP1Q8WVY7 318 aaPredicted RBP19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 KAT2AQ92830 837 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 TRIM44Q96DX7 344 aaPredicted RBP19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 CCDC126Q96EE4 140 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 C11orf24Q96F05 449 aaPredicted RBP19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 TMEM41AQ96HV5 264 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 NODALQ96S42 347 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 METTL7AQ9H8H3 244 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 EHD3Q9NZN3 535 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 C15orf41Q9Y2V0 281 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 PCDHGB3Q9Y5G1 929 aa19.47■□□□□ 0.71
CSNK1D-215ENST00000580784 TEP1Q99973 2627 aaKnown RBP19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 SERTM1A2A2V5 107 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 CCDC151A5D8V7 595 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 ACOX3O15254 700 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 NME6O75414 186 aaPredicted RBP19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 ANXA4P09525 319 aaPredicted RBP19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 NAGLUP54802 743 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 CRYZQ08257 329 aaKnown RBP19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 PLCXD2Q0VAA5 305 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 HEPACAMQ14CZ8 416 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 TOMM20Q15388 145 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 SPDYAQ5MJ70 313 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 TIGD3Q6B0B8 471 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 GALNT18Q6P9A2 607 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 SEM1Q6ZVN7 128 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 DMRTC2Q8IXT2 367 aaPredicted RBP19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 CNPY4Q8N129 248 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 OR9A2Q8NGT5 310 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 ZNF675Q8TD23 568 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 TIMP4Q99727 224 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 C12orf65Q9H3J6 166 aaKnown RBP19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 MCCC2Q9HCC0 563 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 PRODH2Q9UF12 536 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 GPR55Q9Y2T6 319 aaPredicted RBP19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 SLC6A5Q9Y345 797 aa19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 ANKRD17O75179 2603 aaKnown RBP19.46■□□□□ 0.71
CSNK1D-215ENST00000580784 SMIM23A6NLE4 172 aa19.45■□□□□ 0.7
CSNK1D-215ENST00000580784 ICOSLGO75144 302 aa19.45■□□□□ 0.7
CSNK1D-215ENST00000580784 UGT2B11O75310 529 aa19.45■□□□□ 0.7
CSNK1D-215ENST00000580784 PTPN6P29350 595 aa19.45■□□□□ 0.7
CSNK1D-215ENST00000580784 PTGDSP41222 190 aa19.45■□□□□ 0.7
CSNK1D-215ENST00000580784 DCAF7P61962 342 aa19.45■□□□□ 0.7
CSNK1D-215ENST00000580784 EIPR1Q53HC9 387 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms