RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 OR6K3Q8NGY3 331 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 MRPL24Q96A35 216 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 LINGO1Q96FE5 620 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 HIST1H2AHQ96KK5 128 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 HIST1H2AJQ99878 128 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 PIMREGQ9BSJ6 248 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 H2AFJQ9BTM1 129 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 GRIP2Q9C0E4 1043 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 NXF5Q9H1B4 397 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 CCDC68Q9H2F9 335 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 CBLN4Q9NTU7 201 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 EMC9Q9Y3B6 208 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 SYNDIG1LA6NDD5 238 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 PRAMEF25A6NGN4 478 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 GLOD5A6NK44 160 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 H3BML4 177 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 SAP18O00422 153 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 PFDN6O15212 129 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 TJP3O95049 919 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 PYGBP11216 843 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 PSMB1P20618 241 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 ADH6P28332 368 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 TMED10P49755 219 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 EFNA4P52798 201 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 TERF1P54274 439 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 COPS2P61201 443 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 TIAL1Q01085 375 aaKnown RBP eCLIP12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 KIF5AQ12840 1032 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 FGFBP1Q14512 234 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 SLC30A6Q6NXT4 461 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 DEF8Q6ZN54 512 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 PLCZ1Q86YW0 608 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 SVOPLQ8N434 492 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 STEAP2Q8NFT2 490 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 PIWIL2Q8TC59 973 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 KCTD4Q8WVF5 259 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 ALG3Q92685 438 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 RIT1Q92963 219 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 ADIPOR1Q96A54 375 aa12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 TRMT6Q9UJA5 497 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-213ENST00000580446 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 EFCAB8A8MWE9 144 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 UGT2B11O75310 529 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 PPM1BO75688 479 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 PTMAP06454 111 aaKnown RBP12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 CT62P0C5K7 136 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 ZSCAN5DPP0CG00 497 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 ZNF23P17027 643 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 IL32P24001 234 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 ATP5A1P25705 553 aaKnown RBP12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 CTNNA1P35221 906 aaKnown RBP12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 PDLIM4P50479 330 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 NRG3P56975 720 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 SP140Q13342 867 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 RAET1LQ5VY80 246 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 PAQR3Q6TCH7 311 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 TMIGD1Q6UXZ0 262 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 RBM43Q6ZSC3 357 aaKnown RBP12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 MYO1HQ8N1T3 1032 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 MUC15Q8N387 334 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 ACOT4Q8N9L9 421 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 ZNF418Q8TF45 676 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 TAF15Q92804 592 aaKnown RBP eCLIP12.48□□□□□ -0.416e-6■■□□□ 12.5
CSNK1D-213ENST00000580446 FBXL8Q96CD0 374 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 RBM4Q9BWF3 364 aaKnown RBP12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 BPESC1Q9GZL8 116 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 LYRM4Q9HD34 91 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 PRM3Q9NNZ6 103 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 NPAP1Q9NZP6 1156 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 WHRNQ9P202 907 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 KLHL42Q9P2K6 505 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 PCDHB10Q9UN67 800 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 ZNF337Q9Y3M9 751 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 ZNF175Q9Y473 711 aa12.48□□□□□ -0.41
CSNK1D-213ENST00000580446 OR6C76A6NM76 312 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 SHISA8B8ZZ34 492 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 TNFRSF21O75509 655 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 CSF3P09919 207 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 PEPDP12955 493 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 PTPN7P35236 360 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 FDFT1P37268 417 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 BUD31P41223 144 aaPredicted RBP12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 SLC1A2P43004 574 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 GDF5P43026 501 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 HILS1P60008 231 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 P2RY6Q15077 328 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 STK11Q15831 433 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 BCL2A1Q16548 175 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 SPRED3Q2MJR0 410 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 ADPRMQ3LIE5 342 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 BEND4Q6ZU67 534 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 CCDC25Q86WR0 208 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 CEP112Q8N8E3 955 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 BBOF1Q8ND07 529 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 SLC35B2Q8TB61 432 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 OMA1Q96E52 524 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 KIFC1Q9BW19 673 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 C1QTNF5Q9BXJ0 243 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 PRRG4Q9BZD6 226 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 RPF2Q9H7B2 306 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms