RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 PCSK2P16519 638 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 ABCD3P28288 659 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 ETV4P43268 484 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 SMSP52788 366 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 KCNJ2P63252 427 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 PSPHP78330 225 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 MRPS35P82673 323 aaKnown RBP13.64□□□□□ -0.23
SS18-212ENST00000579061 SLC10A1Q14973 349 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 LTB4RQ15722 352 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 ARL13AQ5H913 290 aaPredicted RBP13.64□□□□□ -0.23
SS18-212ENST00000579061 PRAMEF20Q5VT98 475 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 MRGPRGQ86SM5 289 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 TICAM1Q8IUC6 712 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 FAM9CQ8IZT9 166 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 OR52R1Q8NGF1 315 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 OR6Y1Q8NGX8 325 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 DIO2Q92813 273 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 ZNF764Q96H86 408 aaPredicted RBP13.64□□□□□ -0.23
SS18-212ENST00000579061 PHF12Q96QT6 1004 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 ITPAQ9BY32 194 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 TUBB1Q9H4B7 451 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 MIEF1Q9NQG6 463 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 TMED5Q9Y3A6 229 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 TRAF6Q9Y4K3 522 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 DNAJC15Q9Y5T4 150 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 KLF2Q9Y5W3 355 aaPredicted RBP13.64□□□□□ -0.23
SS18-212ENST00000579061 MAST4O15021 2626 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 CACNA1CQ13936 2221 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 NCKAP5O14513 1909 aa13.64□□□□□ -0.23
SS18-212ENST00000579061 UNC79Q9P2D8 2635 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 A0A087WV62 115 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 FRG2CA6NGY1 282 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 AQP7O14520 342 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 TO15178 435 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 CTIFO43310 598 aaKnown RBP13.63□□□□□ -0.23
SS18-212ENST00000579061 HCN1O60741 890 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 TRIM3O75382 744 aaPredicted RBP13.63□□□□□ -0.23
SS18-212ENST00000579061 PPM1BO75688 479 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 SNX4O95219 450 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 TPOP07202 933 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 CHRNGP07510 517 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 ABCB1P08183 1280 aaPredicted RBP13.63□□□□□ -0.23
SS18-212ENST00000579061 IFI6P09912 130 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 MAGEA5P43359 124 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 FBXW4P57775 412 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 ADORA2A-AS1P86434 159 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 UGT3A2Q3SY77 523 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 TNFAIP8L3Q5GJ75 292 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 TMEM198Q66K66 360 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 TMEM64Q6YI46 380 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 TRILQ7L0X0 811 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 NUP54Q7Z3B4 507 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 CD163Q86VB7 1156 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 SLC34A3Q8N130 599 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 SIMC1Q8NDZ2 872 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 OR9A2Q8NGT5 310 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 CDC26Q8NHZ8 85 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 NTNG2Q96CW9 530 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 ZNF597Q96LX8 424 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 BTBD9Q96Q07 612 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 DMRTA2Q96SC8 542 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 CCT7Q99832 543 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 DOHHQ9BU89 302 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 ANGPTL4Q9BY76 406 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 TP63Q9H3D4 680 aaPredicted RBP13.63□□□□□ -0.23
SS18-212ENST00000579061 ZNF703Q9H7S9 590 aaPredicted RBP13.63□□□□□ -0.23
SS18-212ENST00000579061 EXO1Q9UQ84 846 aaKnown RBP13.63□□□□□ -0.23
SS18-212ENST00000579061 GPR55Q9Y2T6 319 aaPredicted RBP13.63□□□□□ -0.23
SS18-212ENST00000579061 FIS1Q9Y3D6 152 aa13.63□□□□□ -0.23
SS18-212ENST00000579061 CACNA1DQ01668 2161 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 LRRC3CA6NJW4 275 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 PLOD2O00469 737 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 ADAM10O14672 748 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 BCKDKO14874 412 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 ZNHIT1O43257 154 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 TBX19O60806 448 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 PDE9AO76083 593 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 NTSP30990 170 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 CASP3P42574 277 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 CRYBG3Q68DQ2 2970 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 HIST2H2BCQ6DN03 193 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 TMEM211Q6ICI0 200 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 ZCCHC23Q6ZST2 131 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 OR5M3Q8NGP4 307 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 OR2T11Q8NH01 316 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 TWIST2Q8WVJ9 160 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 KAT2AQ92830 837 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 OMA1Q96E52 524 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 ACKR4Q9NPB9 350 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 TAS2R9Q9NYW1 312 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 B4GALT7Q9UBV7 327 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 PTGDR2Q9Y5Y4 395 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 ACTL7BQ9Y614 415 aa13.62□□□□□ -0.23
SS18-212ENST00000579061 CENPEQ02224 2701 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 ATP6AP2A0A1C7CYW4 349 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 LSM1O15116 133 aaKnown RBP13.61□□□□□ -0.23
SS18-212ENST00000579061 TM9SF1O15321 606 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 BIRC5O15392 142 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 ABCB7O75027 752 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 COQ9O75208 318 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms