RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 RNASE6Q93091 150 aaKnown RBP8.15□□□□□ -1.1
GGA3-207ENST00000578896 HGDQ93099 445 aa8.15□□□□□ -1.1
GGA3-207ENST00000578896 ABTB1Q969K4 478 aaPredicted RBP8.15□□□□□ -1.1
GGA3-207ENST00000578896 KLHL29Q96CT2 875 aa8.15□□□□□ -1.1
GGA3-207ENST00000578896 NTMT1Q9BV86 223 aa8.15□□□□□ -1.1
GGA3-207ENST00000578896 TMUB1Q9BVT8 246 aa8.15□□□□□ -1.1
GGA3-207ENST00000578896 PRDM14Q9GZV8 571 aa8.15□□□□□ -1.1
GGA3-207ENST00000578896 CDC42EP4Q9H3Q1 356 aaKnown RBP8.15□□□□□ -1.1
GGA3-207ENST00000578896 GSX1Q9H4S2 264 aaPredicted RBP8.15□□□□□ -1.1
GGA3-207ENST00000578896 ELOVL6Q9H5J4 265 aa8.15□□□□□ -1.1
GGA3-207ENST00000578896 METTL7AQ9H8H3 244 aa8.15□□□□□ -1.1
GGA3-207ENST00000578896 PSD3Q9NYI0 1048 aa8.15□□□□□ -1.1
GGA3-207ENST00000578896 AHSPQ9NZD4 102 aa8.15□□□□□ -1.1
GGA3-207ENST00000578896 HEY2Q9UBP5 337 aa8.15□□□□□ -1.1
GGA3-207ENST00000578896 DMGDHQ9UI17 866 aaKnown RBP8.15□□□□□ -1.1
GGA3-207ENST00000578896 ST6GALNAC2Q9UJ37 374 aa8.15□□□□□ -1.1
GGA3-207ENST00000578896 PLLPQ9Y342 182 aa8.15□□□□□ -1.1
GGA3-207ENST00000578896 HEATR5AQ86XA9 2040 aa8.15□□□□□ -1.11
GGA3-207ENST00000578896 USF3Q68DE3 2245 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 DNHD1Q96M86 4753 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 FAM221AA4D161 298 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 A6NNC1 897 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 A8MT66 165 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 TRIM49D1C9J1S8 452 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 FAM47E-STBD1D6RA91 191 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 STX16-NPEPL1H3BU86 382 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 STX16O14662 325 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 ICOSLGO75144 302 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 ESRRBO95718 433 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 INHBAP08476 426 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 RPS17P08708 135 aaKnown RBP8.14□□□□□ -1.11
GGA3-207ENST00000578896 RBP1P09455 135 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 KLK2P20151 261 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 PHBP35232 272 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 TIMP3P35625 211 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 PLCXD2Q0VAA5 305 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 MAP4K2Q12851 820 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 FLYWCH1Q4VC44 716 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 C6orf163Q5TEZ5 329 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 NSUN5P2Q63ZY6 315 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 SLC48A1Q6P1K1 146 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 SCIMPQ6UWF3 145 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 PAGE2Q7Z2X7 111 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 ZNF572Q7Z3I7 529 aaPredicted RBP8.14□□□□□ -1.11
GGA3-207ENST00000578896 CCDC91Q7Z6B0 441 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 TGIF2LYQ8IUE0 185 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 LACC1Q8IV20 430 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 CCDC116Q8IYX3 515 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 VWA5B2Q8N398 1253 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 TMEM151AQ8N4L1 468 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 C1orf52Q8N6N3 182 aaKnown RBP8.14□□□□□ -1.11
GGA3-207ENST00000578896 WDSUB1Q8N9V3 476 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 NOA1Q8NC60 698 aaKnown RBP8.14□□□□□ -1.11
GGA3-207ENST00000578896 OR7G1Q8NGA0 311 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 OR1J4Q8NGS1 313 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 GOT1L1Q8NHS2 421 aaPredicted RBP8.14□□□□□ -1.11
GGA3-207ENST00000578896 ZNF483Q8TF39 744 aaPredicted RBP8.14□□□□□ -1.11
GGA3-207ENST00000578896 DCAKDQ8WVC6 231 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 KAT2AQ92830 837 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 TMBIM1Q969X1 311 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 NTNG2Q96CW9 530 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 CNRIP1Q96F85 164 aaPredicted RBP8.14□□□□□ -1.11
GGA3-207ENST00000578896 RMND5BQ96G75 393 aaPredicted RBP8.14□□□□□ -1.11
GGA3-207ENST00000578896 TMEM41AQ96HV5 264 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 LCORQ96JN0 433 aaPredicted RBP8.14□□□□□ -1.11
GGA3-207ENST00000578896 PAFAH2Q99487 392 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 FOXC2Q99958 501 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 TUBA1CQ9BQE3 449 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 OSBPL11Q9BXB4 747 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 PFDN4Q9NQP4 134 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 KLRF1Q9NZS2 232 aa8.14□□□□□ -1.11
GGA3-207ENST00000578896 NUP214P35658 2090 aaPredicted RBP8.14□□□□□ -1.11
GGA3-207ENST00000578896 C1orf226A1L170 272 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 TUBAL3A6NHL2 446 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 B4DXG7 233 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 MANBAO00462 879 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 SNPHO15079 494 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 REM1O75628 298 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 URI1O94763 535 aaPredicted RBP8.13□□□□□ -1.11
GGA3-207ENST00000578896 IL3P08700 152 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 CTAGE8P0CG41 777 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 TMIGD3P0DMS9 266 aaPredicted RBP8.13□□□□□ -1.11
GGA3-207ENST00000578896 CSNK2A2P19784 350 aaPredicted RBP8.13□□□□□ -1.11
GGA3-207ENST00000578896 DNASE1P24855 282 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 CTSSP25774 331 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 HSD17B3P37058 310 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 TMED10P49755 219 aaKnown RBP8.13□□□□□ -1.11
GGA3-207ENST00000578896 EMDP50402 254 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 HTR6P50406 440 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 DGKQP52824 942 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 CORO7P57737 925 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 RPP38P78345 283 aaKnown RBP8.13□□□□□ -1.11
GGA3-207ENST00000578896 BTKQ06187 659 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 FOXD4Q12950 439 aaPredicted RBP8.13□□□□□ -1.11
GGA3-207ENST00000578896 PRSS53Q2L4Q9 553 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 UNC50Q53HI1 259 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 FBXW10Q5XX13 1052 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 NUP54Q7Z3B4 507 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 LUZP2Q86TE4 346 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 TRIM42Q8IWZ5 723 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms