RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 OR51I1Q9H343 314 aa12.39□□□□□ -0.43
CDK5RAP3-205ENST00000577802 EQTNQ9NQ60 294 aa12.39□□□□□ -0.43
CDK5RAP3-205ENST00000577802 DUSP22Q9NRW4 184 aa12.39□□□□□ -0.43
CDK5RAP3-205ENST00000577802 GPATCH2Q9NW75 528 aa12.39□□□□□ -0.43
CDK5RAP3-205ENST00000577802 ZNF639Q9UID6 485 aa12.39□□□□□ -0.43
CDK5RAP3-205ENST00000577802 ERVK-19Q9WJR5 959 aa12.39□□□□□ -0.43
CDK5RAP3-205ENST00000577802 FER1L5A0AVI2 2057 aa12.39□□□□□ -0.43
CDK5RAP3-205ENST00000577802 PCNX2A6NKB5 2137 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 PTPRBP23467 1997 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 LOC102723996A0A087X1L8 192 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 A0A1W2PNU3 283 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 PMS2P1A4D2B8 440 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 ANKRD65E5RJM6 399 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 ARPC2O15144 300 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 TNFRSF21O75509 655 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 ARAFP10398 606 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 LIPCP11150 499 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 ETFAP13804 333 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 GGT1P19440 569 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 MMP11P24347 488 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 MVDP53602 400 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 MGAT2Q10469 447 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 DNASE1L3Q13609 305 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 SCARB2Q14108 478 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 ELOAQ14241 798 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 RTP5Q14D33 572 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 EXT1Q16394 746 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 TRMT12Q53H54 448 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 HLA-DQA1Q5Y7H0 255 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 TNFAIP8L2Q6P589 184 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 SHISA6Q6ZSJ9 500 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 SLC29A4Q7RTT9 530 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 KRT73Q86Y46 540 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 ZZZ3Q8IYH5 903 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 EID3Q8N140 333 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 IL22RA1Q8N6P7 574 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 HIPK4Q8NE63 616 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 B3GNT7Q8NFL0 401 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 BBS10Q8TAM1 723 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 SLC2A12Q8TD20 617 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 PTPMT1Q8WUK0 201 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 RASSF5Q8WWW0 418 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 FAM162AQ96A26 154 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 VMP1Q96GC9 406 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 RSRC1Q96IZ7 334 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 IP6K3Q96PC2 410 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 TRIM8Q9BZR9 551 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 OR10A5Q9H207 317 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 Q9N2J8 555 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 MRTO4Q9UKD2 239 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 TCFL5Q9UL49 500 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 ERVK-11Q9UQG0 969 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 PCDHGA6Q9Y5G7 932 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 HEMK1Q9Y5R4 338 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 GVINP1Q7Z2Y8 2422 aa12.38□□□□□ -0.43
CDK5RAP3-205ENST00000577802 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 TEX51A0A1B0GUA7 166 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 A0A1W2PQ72 361 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 AQP12BA6NM10 295 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 HMGN4O00479 90 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 CXCR6O00574 342 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 CBX7O95931 251 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 CT62P0C5K7 136 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 NR2F1P10589 423 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 DLSTP36957 453 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 ACTR3P61158 418 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 CDK6Q00534 326 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 PUM1Q14671 1186 aaKnown RBP eCLIP12.37□□□□□ -0.432e-9■■□□□ 12.1
CDK5RAP3-205ENST00000577802 SSPNQ14714 243 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 EXOSC7Q15024 291 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 COX20Q5RI15 118 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 FAAH2Q6GMR7 532 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 LCN10Q6JVE6 187 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 REEP3Q6NUK4 255 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 FAM199XQ6PEV8 388 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 PAPD4Q6PIY7 484 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 LANCL3Q6ZV70 420 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 PATL1Q86TB9 770 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 LAPTM4BQ86VI4 370 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 AQP12AQ8IXF9 295 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 CLEC4FQ8N1N0 589 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 HORMAD2Q8N7B1 307 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 COX18Q8N8Q8 333 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 C17orf47Q8NEP4 570 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 BHLHE22Q8NFJ8 381 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 OR52E4Q8NGH9 312 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 OR1N1Q8NGS0 311 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 FIG4Q92562 907 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 SLC9A6Q92581 669 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 PMM1Q92871 262 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 RNF31Q96EP0 1072 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 GIMAP5Q96F15 307 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 SENP5Q96HI0 755 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 OR7D2Q96RA2 312 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 ZNF607Q96SK3 696 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 LMF2Q9BU23 707 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 SPATA5L1Q9BVQ7 753 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 BTBD2Q9BX70 525 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 OR8D2Q9GZM6 311 aa12.37□□□□□ -0.43
CDK5RAP3-205ENST00000577802 PIGUQ9H490 435 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms