RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 OR2M7Q8NG81 312 aa17.8■□□□□ 0.44
SS18-208ENST00000577751 ELP4Q96EB1 424 aa17.8■□□□□ 0.44
SS18-208ENST00000577751 HSPBAP1Q96EW2 488 aa17.8■□□□□ 0.44
SS18-208ENST00000577751 SACM1LQ9NTJ5 587 aa17.8■□□□□ 0.44
SS18-208ENST00000577751 SH3BP4Q9P0V3 963 aa17.8■□□□□ 0.44
SS18-208ENST00000577751 SEC14L3Q9UDX4 400 aa17.8■□□□□ 0.44
SS18-208ENST00000577751 GPR55Q9Y2T6 319 aaPredicted RBP17.8■□□□□ 0.44
SS18-208ENST00000577751 CHCHD2Q9Y6H1 151 aaPredicted RBP17.8■□□□□ 0.44
SS18-208ENST00000577751 POLEQ07864 2286 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 A0A0G2JMM0 328 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 A0A1W2PPB8 328 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 A0A1W2PRS3 328 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 KIR3DP1A8MWS1 328 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 CAPN14A8MX76 684 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 HMGB1P1B2RPK0 211 aaPredicted RBP17.79■□□□□ 0.44
SS18-208ENST00000577751 SCAMP2O15127 329 aaKnown RBP17.79■□□□□ 0.44
SS18-208ENST00000577751 TO15178 435 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 ACOX3O15254 700 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 PDPK1O15530 556 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 SASH3O75995 380 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 PSMG1O95456 288 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 P04436 131 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 CT45A8P0DMV1 189 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 CT45A9P0DMV2 189 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 NAGAP17050 411 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 RPL3P39023 403 aaKnown RBP17.79■□□□□ 0.44
SS18-208ENST00000577751 MC3RP41968 323 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 KRTCAP3Q53RY4 240 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 CT45A2Q5DJT8 189 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 TMEM64Q6YI46 380 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 RIMKLAQ8IXN7 391 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 OR2L13Q8N349 312 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 OR10G3Q8NGC4 313 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 PRR7Q8TB68 274 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 CIDECQ96AQ7 238 aaPredicted RBP17.79■□□□□ 0.44
SS18-208ENST00000577751 PPP1R36Q96LQ0 422 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 VSTM2LQ96N03 204 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 GPR137Q96N19 417 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 BTBD9Q96Q07 612 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 FAM173AQ9BQD7 235 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 NUF2Q9BZD4 464 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 MEAF6Q9HAF1 191 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 PROK2Q9HC23 129 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 ACSS1Q9NUB1 689 aaPredicted RBP17.79■□□□□ 0.44
SS18-208ENST00000577751 TAS2R9Q9NYW1 312 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 NOP53Q9NZM5 478 aaKnown RBP17.79■□□□□ 0.44
SS18-208ENST00000577751 CNIH4Q9P003 139 aa17.79■□□□□ 0.44
SS18-208ENST00000577751 CNOT11Q9UKZ1 510 aaKnown RBP17.79■□□□□ 0.44
SS18-208ENST00000577751 C19orf53Q9UNZ5 99 aaPredicted RBP17.79■□□□□ 0.44
SS18-208ENST00000577751 EIF3LQ9Y262 564 aaKnown RBP17.79■□□□□ 0.44
SS18-208ENST00000577751 FRG2CA6NGY1 282 aa17.78■□□□□ 0.44
SS18-208ENST00000577751 NPIPA5E9PKD4 350 aa17.78■□□□□ 0.44
SS18-208ENST00000577751 UPK1AO00322 258 aa17.78■□□□□ 0.44
SS18-208ENST00000577751 G6PDP11413 515 aa17.78■□□□□ 0.44
SS18-208ENST00000577751 ZNF24P17028 368 aa17.78■□□□□ 0.44
SS18-208ENST00000577751 TMED10P49755 219 aaKnown RBP17.78■□□□□ 0.44
SS18-208ENST00000577751 C21orf58P58505 322 aa17.78■□□□□ 0.44
SS18-208ENST00000577751 FOXO1Q12778 655 aa17.78■□□□□ 0.44
SS18-208ENST00000577751 RPS6KA2Q15349 733 aa17.78■□□□□ 0.44
SS18-208ENST00000577751 TMEM107Q6UX40 140 aa17.78■□□□□ 0.44
SS18-208ENST00000577751 GFRALQ6UXV0 394 aa17.78■□□□□ 0.44
SS18-208ENST00000577751 BNC2Q6ZN30 1099 aaPredicted RBP17.78■□□□□ 0.44
SS18-208ENST00000577751 LARP4Q71RC2 724 aaKnown RBP eCLIP17.78■□□□□ 0.44
SS18-208ENST00000577751 ZNF551Q7Z340 670 aaPredicted RBP17.78■□□□□ 0.44
SS18-208ENST00000577751 FBXW8Q8N3Y1 598 aa17.78■□□□□ 0.44
SS18-208ENST00000577751 FAM13CQ8NE31 585 aa17.78■□□□□ 0.44
SS18-208ENST00000577751 ZNF75CPQ92670 426 aaPredicted RBP17.78■□□□□ 0.44
SS18-208ENST00000577751 ZBED6CLQ96FA7 236 aaPredicted RBP17.78■□□□□ 0.44
SS18-208ENST00000577751 FOLH1BQ9HBA9 442 aa17.78■□□□□ 0.44
SS18-208ENST00000577751 NPIPA1Q9UND3 350 aa17.78■□□□□ 0.44
SS18-208ENST00000577751 ANKRD33BA6NCL7 494 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 ASNA1O43681 348 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 COQ9O75208 318 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 NME6O75414 186 aaPredicted RBP17.77■□□□□ 0.44
SS18-208ENST00000577751 ERN1O75460 977 aaKnown RBP17.77■□□□□ 0.44
SS18-208ENST00000577751 GLSO94925 669 aaPredicted RBP17.77■□□□□ 0.44
SS18-208ENST00000577751 UNC5CO95185 931 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 ABCB1P08183 1280 aaPredicted RBP17.77■□□□□ 0.44
SS18-208ENST00000577751 DDX5P17844 614 aaKnown RBP17.77■□□□□ 0.44
SS18-208ENST00000577751 PRPS1L1P21108 318 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 HPCAL1P37235 193 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 PIGAP37287 484 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 RFC3P40938 356 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 CLDN8P56748 225 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 FBXW4P57775 412 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 KCNK10P57789 538 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 UBAP2LQ14157 1087 aaKnown RBP17.77■□□□□ 0.44
SS18-208ENST00000577751 MLC1Q15049 377 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 NNATQ16517 81 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 HYAL4Q2M3T9 481 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 GK5Q6ZS86 529 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 FAM47EQ6ZV65 393 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 PRR22Q8IZ63 422 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 FAM26EQ8N5C1 309 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 GOLGA6L1Q8N7Z2 621 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 OR7A2PQ8NGA2 310 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 ZFP28Q8NHY6 868 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 NTNG2Q96CW9 530 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 COQ8BQ96D53 544 aa17.77■□□□□ 0.44
SS18-208ENST00000577751 SECISBP2Q96T21 854 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms