RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 CTHRC1Q96CG8 243 aa12.11□□□□□ -0.47
COPS3-214ENST00000577246 TMCO6Q96DC7 493 aa12.11□□□□□ -0.47
COPS3-214ENST00000577246 OMA1Q96E52 524 aa12.11□□□□□ -0.47
COPS3-214ENST00000577246 PGM2Q96G03 612 aa12.11□□□□□ -0.47
COPS3-214ENST00000577246 SFXN2Q96NB2 322 aa12.11□□□□□ -0.47
COPS3-214ENST00000577246 MCMBPQ9BTE3 642 aa12.11□□□□□ -0.47
COPS3-214ENST00000577246 G6PC3Q9BUM1 346 aa12.11□□□□□ -0.47
COPS3-214ENST00000577246 NXF5Q9H1B4 397 aaKnown RBP12.11□□□□□ -0.47
COPS3-214ENST00000577246 CAB39LQ9H9S4 337 aa12.11□□□□□ -0.47
COPS3-214ENST00000577246 GALNT9Q9HCQ5 603 aa12.11□□□□□ -0.47
COPS3-214ENST00000577246 PSD3Q9NYI0 1048 aa12.11□□□□□ -0.47
COPS3-214ENST00000577246 GOLGA6L10A6NI86 522 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 SLC22A20A6NK97 555 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 SUPT3HB4E1H0 165 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 H0YIV9 168 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 PHGDHO43175 533 aaKnown RBP12.1□□□□□ -0.47
COPS3-214ENST00000577246 UGDHO60701 494 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 ABCB7O75027 752 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 SUPT3HO75486 399 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 EEDO75530 441 aaKnown RBP12.1□□□□□ -0.47
COPS3-214ENST00000577246 TP53P04637 393 aaPredicted RBP12.1□□□□□ -0.47
COPS3-214ENST00000577246 ZNF708P17019 499 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 IVDP26440 423 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 BSGP35613 385 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 EEFSECP57772 596 aaKnown RBP12.1□□□□□ -0.47
COPS3-214ENST00000577246 RAB10P61026 200 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 PDIA2Q13087 525 aaKnown RBP12.1□□□□□ -0.47
COPS3-214ENST00000577246 HEPHL1Q6MZM0 1159 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 MILR1Q7Z6M3 343 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 PLCZ1Q86YW0 608 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 RDH11Q8TC12 318 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 HGDQ93099 445 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 STARD4Q96DR4 205 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 LCORQ96JN0 433 aaPredicted RBP12.1□□□□□ -0.47
COPS3-214ENST00000577246 UBXN10Q96LJ8 280 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 OSBPL9Q96SU4 736 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 ZNF717Q9BY31 904 aaPredicted RBP12.1□□□□□ -0.47
COPS3-214ENST00000577246 DDX47Q9H0S4 455 aaKnown RBP12.1□□□□□ -0.47
COPS3-214ENST00000577246 ALG9Q9H6U8 611 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 ZNF701Q9NV72 531 aaPredicted RBP12.1□□□□□ -0.47
COPS3-214ENST00000577246 DKKL1Q9UK85 242 aa12.1□□□□□ -0.47
COPS3-214ENST00000577246 MTO1Q9Y2Z2 717 aaKnown RBP12.1□□□□□ -0.47
COPS3-214ENST00000577246 MRPS18CQ9Y3D5 142 aaKnown RBP12.1□□□□□ -0.47
COPS3-214ENST00000577246 COL6A5A8TX70 2615 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 WASHC1A8K0Z3 465 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 SYCE1LA8MT33 242 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 KERAO60938 352 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 SEMA3DO95025 777 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 TGM6O95932 706 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 CT62P0C5K7 136 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 CPMP14384 443 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 PPP3CBP16298 524 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 PORP16435 677 aaPredicted RBP12.09□□□□□ -0.47
COPS3-214ENST00000577246 XKP51811 444 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 NR1H2P55055 460 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 ATP5J2P56134 94 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 CLDN18P56856 261 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 PSPHP78330 225 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 ZKSCAN8Q15776 578 aaPredicted RBP12.09□□□□□ -0.47
COPS3-214ENST00000577246 ETFDHQ16134 617 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 NNATQ16517 81 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 BEX5Q5H9J7 111 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 HMBOX1Q6NT76 420 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 RNF175Q8N4F7 328 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 TEX9Q8N6V9 391 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 WDSUB1Q8N9V3 476 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 TMEM158Q8WZ71 300 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 ZNF845Q96IR2 970 aaPredicted RBP12.09□□□□□ -0.47
COPS3-214ENST00000577246 NODALQ96S42 347 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 GPR22Q99680 433 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 CPNE1Q99829 537 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 NMRAL1Q9HBL8 299 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 FANCFQ9NPI8 374 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 PRODH2Q9UF12 536 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 BCAP29Q9UHQ4 241 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 PPP2R2CQ9Y2T4 447 aa12.09□□□□□ -0.47
COPS3-214ENST00000577246 FBN1P35555 2871 aaKnown RBP12.08□□□□□ -0.48
COPS3-214ENST00000577246 UQCRHLA0A096LP55 91 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 C2orf72A6NCS6 295 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 LRRC14BA6NHZ5 514 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 FOXE1O00358 373 aaPredicted RBP12.08□□□□□ -0.48
COPS3-214ENST00000577246 PGRMC2O15173 223 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 EMC8O43402 210 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 GUCY1B2O75343 617 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 ALDOAP04075 364 aaKnown RBP12.08□□□□□ -0.48
COPS3-214ENST00000577246 CD8BP10966 210 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 PEPDP12955 493 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 CNTFP26441 200 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 GMPRP36959 345 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 PTGDSP41222 190 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 PIK3CGP48736 1102 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 STARP49675 285 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 HMGCS1Q01581 520 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 VWA1Q6PCB0 445 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 ZNF474Q6S9Z5 364 aaPredicted RBP12.08□□□□□ -0.48
COPS3-214ENST00000577246 PLXDC2Q6UX71 529 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 RAPH1Q70E73 1250 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 PAGE2Q7Z2X7 111 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 TBC1D1Q86TI0 1168 aaPredicted RBP12.08□□□□□ -0.48
COPS3-214ENST00000577246 ADCY4Q8NFM4 1077 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms