RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 LGI1O95970 557 aa22.21■■□□□ 1.15
NPLOC4-217ENST00000574897 TNFP01375 233 aa22.21■■□□□ 1.15
NPLOC4-217ENST00000574897 IGFBP4P22692 258 aa22.21■■□□□ 1.15
NPLOC4-217ENST00000574897 XKP51811 444 aa22.21■■□□□ 1.15
NPLOC4-217ENST00000574897 TARDBPQ13148 414 aaKnown RBP eCLIP22.21■■□□□ 1.152e-6■■■■□ 21.4
NPLOC4-217ENST00000574897 UBE2UQ5VVX9 321 aa22.21■■□□□ 1.15
NPLOC4-217ENST00000574897 PTCHD4Q6ZW05 846 aa22.21■■□□□ 1.15
NPLOC4-217ENST00000574897 TDHQ8IZJ6 230 aa22.21■■□□□ 1.15
NPLOC4-217ENST00000574897 FAM160A2Q8N612 972 aaPredicted RBP22.21■■□□□ 1.15
NPLOC4-217ENST00000574897 B3GNT7Q8NFL0 401 aa22.21■■□□□ 1.15
NPLOC4-217ENST00000574897 GPBAR1Q8TDU6 330 aa22.21■■□□□ 1.15
NPLOC4-217ENST00000574897 C3orf14Q9HBI5 128 aa22.21■■□□□ 1.15
NPLOC4-217ENST00000574897 CORINQ9Y5Q5 1042 aa22.21■■□□□ 1.15
NPLOC4-217ENST00000574897 HS3ST3A1Q9Y663 406 aa22.21■■□□□ 1.15
NPLOC4-217ENST00000574897 LAMA1P25391 3075 aa22.21■■□□□ 1.15
NPLOC4-217ENST00000574897 H0YGG7 62 aa22.2■■□□□ 1.15
NPLOC4-217ENST00000574897 HCRTR1O43613 425 aa22.2■■□□□ 1.15
NPLOC4-217ENST00000574897 FCMRO60667 390 aa22.2■■□□□ 1.15
NPLOC4-217ENST00000574897 OSMP13725 252 aa22.2■■□□□ 1.15
NPLOC4-217ENST00000574897 CD36P16671 472 aa22.2■■□□□ 1.15
NPLOC4-217ENST00000574897 ARF3P61204 181 aaPredicted RBP22.2■■□□□ 1.15
NPLOC4-217ENST00000574897 ST3GAL4Q11206 333 aa22.2■■□□□ 1.15
NPLOC4-217ENST00000574897 C11orf91Q3C1V1 193 aa22.2■■□□□ 1.15
NPLOC4-217ENST00000574897 CACTIN-AS1Q8N1I8 211 aa22.2■■□□□ 1.15
NPLOC4-217ENST00000574897 SLC16A11Q8NCK7 471 aa22.2■■□□□ 1.15
NPLOC4-217ENST00000574897 RLN3Q8WXF3 142 aa22.2■■□□□ 1.15
NPLOC4-217ENST00000574897 GPR174Q9BXC1 333 aa22.2■■□□□ 1.15
NPLOC4-217ENST00000574897 DNAAF2Q9NVR5 837 aaKnown RBP22.2■■□□□ 1.15
NPLOC4-217ENST00000574897 TNRC18O15417 2968 aaPredicted RBP22.2■■□□□ 1.14
NPLOC4-217ENST00000574897 C10orf142B7Z368 130 aa22.2■■□□□ 1.14
NPLOC4-217ENST00000574897 H3BN98 237 aa22.2■■□□□ 1.14
NPLOC4-217ENST00000574897 MRPS14O60783 128 aaKnown RBP22.2■■□□□ 1.14
NPLOC4-217ENST00000574897 SOX18P35713 384 aa22.2■■□□□ 1.14
NPLOC4-217ENST00000574897 SUZ12Q15022 739 aaKnown RBP22.2■■□□□ 1.14
NPLOC4-217ENST00000574897 OR5T3Q8NGG3 340 aa22.2■■□□□ 1.14
NPLOC4-217ENST00000574897 MYDGFQ969H8 173 aa22.2■■□□□ 1.14
NPLOC4-217ENST00000574897 SLC35A4Q96G79 324 aa22.2■■□□□ 1.14
NPLOC4-217ENST00000574897 FNDC11Q9BVV2 318 aa22.2■■□□□ 1.14
NPLOC4-217ENST00000574897 STARD5Q9NSY2 213 aa22.2■■□□□ 1.14
NPLOC4-217ENST00000574897 DAPP1Q9UN19 280 aa22.2■■□□□ 1.14
NPLOC4-217ENST00000574897 MGAT4BQ9UQ53 548 aa22.2■■□□□ 1.14
NPLOC4-217ENST00000574897 CHST2Q9Y4C5 530 aa22.2■■□□□ 1.14
NPLOC4-217ENST00000574897 A0A0G2JPF8 293 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 HNRNPCL2B2RXH8 293 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 HNRNPCL3B7ZW38 293 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 PTHP01270 115 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 TP53P04637 393 aaPredicted RBP22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 HNRNPCL4P0DMR1 293 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 RABIFP47224 123 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 UGT2B15P54855 530 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 FBXO43Q4G163 708 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 LRRC25Q8N386 305 aaPredicted RBP22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 SLC15A4Q8N697 577 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 IQCF1Q8N6M8 205 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 MOAP1Q96BY2 351 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 GPA33Q99795 319 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 HRASLS2Q9NWW9 162 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 SLC9A8Q9Y2E8 581 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 PRAMEF26H0Y7S4 382 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 PDX1P52945 283 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 HOXC5Q00444 222 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 MOGQ16653 247 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 ARHGAP22Q7Z5H3 698 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 BCDIN3DQ7Z5W3 292 aaKnown RBP22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 STX19Q8N4C7 294 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 TMEM52Q8NDY8 209 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 SERINC2Q96SA4 455 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 ZFYVE21Q9BQ24 234 aa22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 POLR2J3Q9H1A7 115 aaKnown RBP22.19■■□□□ 1.14
NPLOC4-217ENST00000574897 LDB3O75112 727 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 OXSR1O95747 527 aaPredicted RBP22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 CTSBP07858 339 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 MMP11P24347 488 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 ANXA11P50995 505 aaKnown RBP22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 UBE2IP63279 158 aaKnown RBP22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 FZD2Q14332 565 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 TBCEQ15813 527 aaPredicted RBP22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 ZNF311Q5JNZ3 666 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 KIAA0895LQ68EN5 471 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 TAF8Q7Z7C8 310 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 IQCHQ86VS3 1027 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 ITPAQ9BY32 194 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 TLR4O00206 839 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 B3GALT2O43825 422 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 THEGLP0DJG4 465 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 TYRP1P17643 537 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 TNNI3P19429 210 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 DOC2BQ14184 412 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 C16orf62Q7Z3J2 963 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 ZER1Q7Z7L7 766 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 OR4K5Q8NGD3 323 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 OR4K14Q8NGD5 310 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 CDS1Q92903 461 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 SPATA5L1Q9BVQ7 753 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 BTBD2Q9BX70 525 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 ACTRT3Q9BYD9 372 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 ENOPH1Q9UHY7 261 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 MKLN1Q9UL63 735 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 NTNG1Q9Y2I2 539 aa22.18■■□□□ 1.14
NPLOC4-217ENST00000574897 A0A1W2PRQ8 180 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms