RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 CFLARO15519 480 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 EMC8O43402 210 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 EDF1O60869 148 aaKnown RBP11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 ERN1O75460 977 aaKnown RBP11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 NEURL1O76050 574 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 OR6B1O95007 311 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 RASAL1O95294 804 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 CRYABP02511 175 aaKnown RBP11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 SP1P08047 785 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 ALDOCP09972 364 aaKnown RBP11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 TROVE2P10155 538 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 DRD5P21918 477 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 KRT20P35900 424 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 EMDP50402 254 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 LRRC74AQ0VAA2 488 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 ZNF155Q12901 538 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 INPP5JQ15735 1006 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 PRSS53Q2L4Q9 553 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 VPS26BQ4G0F5 336 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 PDCD4Q53EL6 469 aaKnown RBP11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 ZNF468Q5VIY5 522 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 BHLHB9Q6PI77 547 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 FAM180AQ6UWF9 173 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 C16orf47Q6ZP98 133 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 ZNF551Q7Z340 670 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 SZRD1Q7Z422 152 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 MAVSQ7Z434 540 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 OR2L13Q8N349 312 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 ZNF441Q8N8Z8 693 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 Q8NA96 180 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 GOLM1Q8NBJ4 401 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 OR8J2Q8NGG1 315 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 CPT1CQ8TCG5 803 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 STON2Q8WXE9 905 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 MOAP1Q96BY2 351 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 SPACA9Q96E40 222 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 SCMH1Q96GD3 660 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 MAGED4Q96JG8 741 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 ITPAQ9BY32 194 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 EPN3Q9H201 632 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 CLMPQ9H6B4 373 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 KLHL1Q9NR64 748 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 LUZP4Q9P127 313 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 NPFFR2Q9Y5X5 522 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 GPR45Q9Y5Y3 372 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 COPG1Q9Y678 874 aaKnown RBP11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 FRG2CA6NGY1 282 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 UPK1AO00322 258 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 RNASET2O00584 256 aaKnown RBP11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 NME2P1O60361 137 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 SLC22A3O75751 556 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 P04436 131 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 VIMP08670 466 aaKnown RBP11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 NAGAP17050 411 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 NME2P22392 152 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 S100A3P33764 101 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 MDH1P40925 334 aaKnown RBP11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 IDH3AP50213 366 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 GUCY1A3Q02108 690 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 TLE1Q04724 770 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 SPDYE7PQ495Y7 208 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 COLEC12Q5KU26 742 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 FHL5Q5TD97 284 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 MIER2Q8N344 545 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 BCORP1Q8N888 145 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 PSD4Q8NDX1 1056 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 FAM13CQ8NE31 585 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 NUP43Q8NFH3 380 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 DNAJB8Q8NHS0 232 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 RILPQ96NA2 401 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 BTBD9Q96Q07 612 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 OR52B2Q96RD2 323 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 NXF5Q9H1B4 397 aaKnown RBP11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 CCDC134Q9H6E4 229 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 FOLH1BQ9HBA9 442 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 NPHS2Q9NP85 383 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 SACM1LQ9NTJ5 587 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 ZIM2Q9NZV7 527 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 MRTO4Q9UKD2 239 aaKnown RBP11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 TRIM33Q9UPN9 1127 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 OR10H1Q9Y4A9 318 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 SNX8Q9Y5X2 465 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 EML6Q6ZMW3 1958 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 EXPH5Q8NEV8 1989 aa11.79□□□□□ -0.52
TRAPPC1-206ENST00000573989 PRSS51A0A1B0GVH4 220 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 ANKRD28O15084 1053 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 ABCB7O75027 752 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 SOX30O94993 753 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 NADKO95544 446 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 C6orf47O95873 294 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 IL6P05231 212 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 FBXO45P0C2W1 286 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 ABCD3P28288 659 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 SOX18P35713 384 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 PRIM2P49643 509 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 ST13P50502 369 aaKnown RBP11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 PRKAG1P54619 331 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 PSMD4P55036 377 aaKnown RBP11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 MLLT10P55197 1068 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 NME5P56597 212 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms