RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 IL20RBQ6UXL0 311 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 TMEM64Q6YI46 380 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 GALNTL5Q7Z4T8 443 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 MDGA2Q7Z553 956 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 RIMKLAQ8IXN7 391 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 HORMAD2Q8N7B1 307 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 ADIPOR1Q96A54 375 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 TMEM125Q96AQ2 219 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 SCMH1Q96GD3 660 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 MAGED4Q96JG8 741 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 MARK4Q96L34 752 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 TAAR6Q96RI8 345 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 MED4Q9NPJ6 270 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 ASF1BQ9NVP2 202 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 PLEKHB1Q9UF11 243 aaPredicted RBP14.6□□□□□ -0.07
CHD3-215ENST00000572750 ATP6V1HQ9UI12 483 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 USH1CQ9Y6N9 552 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 NME2P1O60361 137 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 SP1P08047 785 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 PRPS1L1P21108 318 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 NME2P22392 152 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 GPC1P35052 558 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 FRKP42685 505 aaPredicted RBP14.59□□□□□ -0.07
CHD3-215ENST00000572750 CDK9P50750 372 aaKnown RBP14.59□□□□□ -0.07
CHD3-215ENST00000572750 NME5P56597 212 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 CLDN8P56748 225 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 SRSF11Q05519 484 aaKnown RBP14.59□□□□□ -0.07
CHD3-215ENST00000572750 ZNF155Q12901 538 aaPredicted RBP14.59□□□□□ -0.07
CHD3-215ENST00000572750 INAQ16352 499 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 MAPKAPK3Q16644 382 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 PIGGQ5H8A4 983 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 CPTPQ5TA50 214 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 OPN5Q6U736 354 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 FAM180AQ6UWF9 173 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 LYPD8Q6UX82 237 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 GPALPP1Q8IXQ4 340 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 LRRC34Q8IZ02 419 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 PRR22Q8IZ63 422 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 TMEM178AQ8NBL3 297 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 ZFP28Q8NHY6 868 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 GRHL3Q8TE85 626 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 ERP27Q96DN0 273 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 ZBED6CLQ96FA7 236 aaPredicted RBP14.59□□□□□ -0.07
CHD3-215ENST00000572750 MAELQ96JY0 434 aaKnown RBP14.59□□□□□ -0.07
CHD3-215ENST00000572750 OR52B2Q96RD2 323 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 NXF5Q9H1B4 397 aaKnown RBP14.59□□□□□ -0.07
CHD3-215ENST00000572750 DDX18Q9NVP1 670 aaKnown RBP14.59□□□□□ -0.07
CHD3-215ENST00000572750 AIG1Q9NVV5 245 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 CFL2Q9Y281 166 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 COPG1Q9Y678 874 aaKnown RBP14.59□□□□□ -0.07
CHD3-215ENST00000572750 PDZD2O15018 2839 aa14.59□□□□□ -0.07
CHD3-215ENST00000572750 EML6Q6ZMW3 1958 aa14.58□□□□□ -0.07
CHD3-215ENST00000572750 A0A0G2JMM0 328 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 A0A1W2PPB8 328 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 A0A1W2PRS3 328 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 KIR3DP1A8MWS1 328 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 G3V3Y1 287 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 CDK2AP1O14519 115 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 ANKRD28O15084 1053 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 PLOD3O60568 738 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 SLITRK5O94991 958 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 MANFP55145 182 aaKnown RBP14.58□□□□□ -0.08
CHD3-215ENST00000572750 CORO7P57737 925 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 C21orf58P58505 322 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 GPR85P60893 370 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 PGS1Q32NB8 556 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 TMEM198Q66K66 360 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 SLC25A25Q6KCM7 469 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 RPUSD3Q6P087 351 aaKnown RBP14.58□□□□□ -0.08
CHD3-215ENST00000572750 SZRD1Q7Z422 152 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 TAGAPQ8N103 731 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 OR2L13Q8N349 312 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 PSD4Q8NDX1 1056 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 FAM13CQ8NE31 585 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 MIB2Q96AX9 1013 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 SPACA9Q96E40 222 aaPredicted RBP14.58□□□□□ -0.08
CHD3-215ENST00000572750 ELP4Q96EB1 424 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 VSTM2LQ96N03 204 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 DPY30Q9C005 99 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 FOLH1BQ9HBA9 442 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 ATAD3AQ9NVI7 634 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 PRODH2Q9UF12 536 aa14.58□□□□□ -0.08
CHD3-215ENST00000572750 A0A087WV62 115 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 TCP11X1B4DZS4 312 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 C9JVG2 144 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 UPK1AO00322 258 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 PLOD2O00469 737 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 ATP8B1O43520 1251 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 COQ9O75208 318 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 RASAL1O95294 804 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 PSMG1O95456 288 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 FBXO45P0C2W1 286 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 CCL3P10147 92 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 DDX5P17844 614 aaKnown RBP14.57□□□□□ -0.08
CHD3-215ENST00000572750 ZNF791Q3KP31 576 aaPredicted RBP14.57□□□□□ -0.08
CHD3-215ENST00000572750 EPGNQ6UW88 154 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 NPSR1Q6W5P4 371 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 RTL4Q6ZR62 310 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 RGS9BPQ6ZS82 235 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 SPATA19Q7Z5L4 167 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms