RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 CPSF6Q16630 551 aaKnown RBP eCLIP17.26■□□□□ 0.35
SCARF1-204ENST00000570902 GRTP1Q5TC63 336 aa17.26■□□□□ 0.35
SCARF1-204ENST00000570902 ZNF572Q7Z3I7 529 aaPredicted RBP17.26■□□□□ 0.35
SCARF1-204ENST00000570902 IFNEQ86WN2 208 aa17.26■□□□□ 0.35
SCARF1-204ENST00000570902 Q96MF0 132 aa17.26■□□□□ 0.35
SCARF1-204ENST00000570902 MDFIQ99750 246 aa17.26■□□□□ 0.35
SCARF1-204ENST00000570902 OR2B2Q9GZK3 357 aa17.26■□□□□ 0.35
SCARF1-204ENST00000570902 NXF5Q9H1B4 397 aaKnown RBP17.26■□□□□ 0.35
SCARF1-204ENST00000570902 ZNF226Q9NYT6 803 aa17.26■□□□□ 0.35
SCARF1-204ENST00000570902 KLRF1Q9NZS2 232 aa17.26■□□□□ 0.35
SCARF1-204ENST00000570902 EXO1Q9UQ84 846 aaKnown RBP17.26■□□□□ 0.35
SCARF1-204ENST00000570902 A0A1W2PS29 197 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 FAM159BA6NKW6 160 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 KIAA1324LA8MWY0 1029 aaPredicted RBP17.25■□□□□ 0.35
SCARF1-204ENST00000570902 ACOX3O15254 700 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 ICOSLGO75144 302 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 SEMA3DO95025 777 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 PCSK6P29122 969 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 CPOXP36551 454 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 PCYT1AP49585 367 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 XKP51811 444 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 PLTPP55058 493 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 PPP2R2BQ00005 443 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 CKAP4Q07065 602 aaKnown RBP17.25■□□□□ 0.35
SCARF1-204ENST00000570902 DLG1Q12959 904 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 SLMAPQ14BN4 828 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 AAGABQ6PD74 315 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 TRIM42Q8IWZ5 723 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 CTAGE3PQ8IX95 158 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 GCNT2Q8N0V5 402 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 CIARTQ8N365 385 aaPredicted RBP17.25■□□□□ 0.35
SCARF1-204ENST00000570902 HGDQ93099 445 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 SERPINI1Q99574 410 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 CCL19Q99731 98 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 RAB17Q9H0T7 212 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 SERHLQ9NQF3 203 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 CLCF1Q9UBD9 225 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 MAPRE3Q9UPY8 281 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 EXPH5Q8NEV8 1989 aa17.25■□□□□ 0.35
SCARF1-204ENST00000570902 CCDC189A1A4V9 331 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 MSTNO14793 375 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 EIF3HO15372 352 aaKnown RBP eCLIP17.24■□□□□ 0.35
SCARF1-204ENST00000570902 CTIFO43310 598 aaKnown RBP17.24■□□□□ 0.35
SCARF1-204ENST00000570902 GBAP04062 536 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 MTHFD2P13995 350 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 CPMP14384 443 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 PORP16435 677 aaPredicted RBP17.24■□□□□ 0.35
SCARF1-204ENST00000570902 GMPRP36959 345 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 MC3RP41968 323 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 PIK3CGP48736 1102 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 PLCXD2Q0VAA5 305 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 TRADDQ15628 312 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 NNATQ16517 81 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 C3orf62Q6ZUJ4 267 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 YTHDF3Q7Z739 585 aaKnown RBP17.24■□□□□ 0.35
SCARF1-204ENST00000570902 CMC1Q7Z7K0 106 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 CCDC25Q86WR0 208 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 GRAMD2AQ8IUY3 354 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 LRRN4CLQ8ND94 238 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 RHEBL1Q8TAI7 183 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 WDR20Q8TBZ3 569 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 OMA1Q96E52 524 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 LCORQ96JN0 433 aaPredicted RBP17.24■□□□□ 0.35
SCARF1-204ENST00000570902 NODALQ96S42 347 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 GALNT9Q9HCQ5 603 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 TAS2R10Q9NYW0 307 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 C6orf203Q9P0P8 240 aaPredicted RBP17.24■□□□□ 0.35
SCARF1-204ENST00000570902 JMJD1CQ15652 2540 aa17.24■□□□□ 0.35
SCARF1-204ENST00000570902 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 PRAMEF25A6NGN4 478 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 GOLGA6L10A6NI86 522 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 SMAD7O15105 426 aaKnown RBP17.23■□□□□ 0.35
SCARF1-204ENST00000570902 TNFSF13O75888 250 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 CRHP06850 196 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 GSTA2P09210 222 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 GFAPP14136 432 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 S1PR1P21453 382 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 PTGDSP41222 190 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 ALDH18A1P54886 795 aaKnown RBP17.23■□□□□ 0.35
SCARF1-204ENST00000570902 GFRA1P56159 465 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 SLC7A5Q01650 507 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 GTF2H2Q13888 395 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 ACKR1Q16570 336 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 PFKFB4Q16877 469 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 GTF2H2CQ6P1K8 395 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 C20orf204Q6ZNR8 217 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 CCDC91Q7Z6B0 441 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 L3MBTL4Q8NA19 623 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 TRIM44Q96DX7 344 aaPredicted RBP17.23■□□□□ 0.35
SCARF1-204ENST00000570902 G6PC3Q9BUM1 346 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 IPPKQ9H8X2 491 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 AHSPQ9NZD4 102 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 BCAP29Q9UHQ4 241 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 ADAM29Q9UKF5 820 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 DTX4Q9Y2E6 619 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 DLGAP4Q9Y2H0 992 aa17.23■□□□□ 0.35
SCARF1-204ENST00000570902 A0A1W2PNV4 684 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 C2orf72A6NCS6 295 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 DEFB108AA8MXU0 73 aa17.22■□□□□ 0.35
SCARF1-204ENST00000570902 PLOD2O00469 737 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms