RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 FNDC11Q9BVV2 318 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 CARD6Q9BX69 1037 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 C8orf33Q9H7E9 229 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 COQ10BQ9H8M1 238 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 PELI2Q9HAT8 420 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 HPS4Q9NQG7 708 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 FAM212BQ9NTI7 297 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 DPP3Q9NY33 737 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 NDUFA13Q9P0J0 144 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 EXTL2Q9UBQ6 330 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 TRIM10Q9UDY6 481 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 ITM2BQ9Y287 266 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 HBS1LQ9Y450 684 aaKnown RBP3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 JRKLQ9Y4A0 524 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 NEUROG3Q9Y4Z2 214 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 SCN1AP35498 2009 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 LAMA5O15230 3695 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 SMIM28A0A1B0GU29 152 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 A0A1W2PPK0 400 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 ERICH4A6NGS2 130 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 UBXN8O00124 270 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 CACNB4O00305 520 aaPredicted RBP3□□□□□ -1.93
HMGB1P6-201ENST00000569046 BUD23O43709 281 aaKnown RBP3□□□□□ -1.93
HMGB1P6-201ENST00000569046 HSF2BPO75031 334 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 NR3C1P04150 777 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 CD48P09326 243 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 OR2T7P0C7T2 308 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 ERVK-10P10266 1014 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 CD59P13987 128 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 FUT1P19526 365 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 CBLP22681 906 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 ACP1P24666 158 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 GNA11P29992 359 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 PEX19P40855 299 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 ATP12AP54707 1039 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 MFAP3P55082 362 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 GSDMDP57764 484 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 SRP54P61011 504 aaKnown RBP3□□□□□ -1.93
HMGB1P6-201ENST00000569046 ACTR1AP61163 376 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 FCHO2Q0JRZ9 810 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 PRKAA1Q13131 559 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 RAPSNQ13702 412 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 RUNX3Q13761 415 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 DPYSQ14117 519 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 MXD4Q14582 209 aaPredicted RBP3□□□□□ -1.93
HMGB1P6-201ENST00000569046 UGP2Q16851 508 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 DUOXA1Q1HG43 343 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 ITPRIPL2Q3MIP1 535 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 FAM174BQ3ZCQ3 159 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 CCDC40Q4G0X9 1142 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 C14orf177Q52M58 125 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 LACTB2Q53H82 288 aaPredicted RBP3□□□□□ -1.93
HMGB1P6-201ENST00000569046 DDX59Q5T1V6 619 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB1P6-201ENST00000569046 LCE1EQ5T753 118 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 NDUFAF5Q5TEU4 345 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 ZDHHC20Q5W0Z9 365 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 SLC8B1Q6J4K2 584 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 ARHGAP11AQ6P4F7 1023 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 RBMS3Q6XE24 437 aaKnown RBP3□□□□□ -1.93
HMGB1P6-201ENST00000569046 TMPRSS11FQ6ZWK6 438 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 OTUD6AQ7L8S5 288 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 NRARPQ7Z6K4 114 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 TMPRSS11BQ86T26 416 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 SYVN1Q86TM6 617 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 PTOV1Q86YD1 416 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 APLFQ8IW19 511 aaPredicted RBP3□□□□□ -1.93
HMGB1P6-201ENST00000569046 BLIDQ8IZY5 108 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 ZNF843Q8N446 348 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 TMEM185AQ8NFB2 350 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 TSTD1Q8NFU3 115 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 RDM1Q8NG50 284 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 PPP4R1Q8TF05 950 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 SETD7Q8WTS6 366 aaKnown RBP3□□□□□ -1.93
HMGB1P6-201ENST00000569046 UBLCP1Q8WVY7 318 aaPredicted RBP3□□□□□ -1.93
HMGB1P6-201ENST00000569046 SLC5A11Q8WWX8 675 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 CTNNBL1Q8WYA6 563 aaPredicted RBP3□□□□□ -1.93
HMGB1P6-201ENST00000569046 SMPDL3BQ92485 455 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 THRSPQ92748 146 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 FAM46BQ96A09 425 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 FAM81BQ96LP2 452 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 NAP1L3Q99457 506 aaPredicted RBP3□□□□□ -1.93
HMGB1P6-201ENST00000569046 JPH2Q9BR39 696 aaPredicted RBP3□□□□□ -1.93
HMGB1P6-201ENST00000569046 ZNF559Q9BR84 538 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 LINC00597Q9H2U6 94 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 SLA2Q9H6Q3 261 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 RPF1Q9H9Y2 349 aaKnown RBP3□□□□□ -1.93
HMGB1P6-201ENST00000569046 APOBEC3GQ9HC16 384 aaKnown RBP3□□□□□ -1.93
HMGB1P6-201ENST00000569046 SLC52A3Q9NQ40 469 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 TRPV5Q9NQA5 729 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 TUBGCP4Q9UGJ1 667 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 DNPEPQ9ULA0 475 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 PLEKHA6Q9Y2H5 1048 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 KIF3AQ9Y496 699 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 FAM208BQ5VWN6 2430 aa3□□□□□ -1.93
HMGB1P6-201ENST00000569046 PCNX2A6NKB5 2137 aa2.99□□□□□ -1.93
HMGB1P6-201ENST00000569046 ANKRD11Q6UB99 2663 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P6-201ENST00000569046 IGF2RP11717 2491 aa2.99□□□□□ -1.93
HMGB1P6-201ENST00000569046 LOC400499M0QZD8 3231 aa2.99□□□□□ -1.93
HMGB1P6-201ENST00000569046 PRSS51A0A1B0GVH4 220 aa2.99□□□□□ -1.93
HMGB1P6-201ENST00000569046 A0A1W2PPW3 197 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms