RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 DR1Q01658 176 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 MGAT2Q10469 447 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 FUT7Q11130 342 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 TBL3Q12788 808 aaKnown RBP13.46□□□□□ -0.25
USB1-214ENST00000568848 SLMAPQ14BN4 828 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 ZKSCAN8Q15776 578 aaPredicted RBP13.46□□□□□ -0.25
USB1-214ENST00000568848 ACKR1Q16570 336 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 BTLAQ7Z6A9 289 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 ADGRE4PQ86SQ3 457 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 GRAMD2AQ8IUY3 354 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 UBQLNLQ8IYU4 475 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 OR5M1Q8NGP8 315 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 KCTD4Q8WVF5 259 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 NXNL1Q96CM4 212 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 UBXN10Q96LJ8 280 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 FAM111AQ96PZ2 611 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 GPR22Q99680 433 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 RBBP8Q99708 897 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 BRINP2Q9C0B6 783 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 MS4A12Q9NXJ0 267 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 NUDT4Q9NZJ9 180 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 BCAP29Q9UHQ4 241 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 PACSIN3Q9UKS6 424 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 IKBKGQ9Y6K9 419 aa13.46□□□□□ -0.25
USB1-214ENST00000568848 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.46□□□□□ -0.25
USB1-214ENST00000568848 PCNX3Q9H6A9 2034 aa13.46□□□□□ -0.26
USB1-214ENST00000568848 E7ESA3 106 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 SIX3O95343 332 aaPredicted RBP13.45□□□□□ -0.26
USB1-214ENST00000568848 CNOT4O95628 575 aaKnown RBP13.45□□□□□ -0.26
USB1-214ENST00000568848 ACTL6AO96019 429 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 MTHFD2P13995 350 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 KRT15P19012 456 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 FEN1P39748 380 aaKnown RBP13.45□□□□□ -0.26
USB1-214ENST00000568848 PAFAH1B1P43034 410 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 XKP51811 444 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 CLDN18P56856 261 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 RAB10P61026 200 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 ATP6V0D1P61421 351 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 MRPS35P82673 323 aaKnown RBP13.45□□□□□ -0.26
USB1-214ENST00000568848 PPP2R2BQ00005 443 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 FIG4Q92562 907 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 UBE2E3Q969T4 207 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 TP53INP1Q96A56 240 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 CTHRC1Q96CG8 243 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 STARD4Q96DR4 205 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 MARK4Q96L34 752 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 OR2B2Q9GZK3 357 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 DDX31Q9H8H2 851 aaKnown RBP13.45□□□□□ -0.26
USB1-214ENST00000568848 ACTR8Q9H981 624 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 SAYSD1Q9NPB0 183 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 LYARQ9NX58 379 aaKnown RBP13.45□□□□□ -0.26
USB1-214ENST00000568848 PLLPQ9Y342 182 aa13.45□□□□□ -0.26
USB1-214ENST00000568848 CHD3Q12873 2000 aaKnown RBP13.45□□□□□ -0.26
USB1-214ENST00000568848 PRAMEF25A6NGN4 478 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 CAPN14A8MX76 684 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 KLK1P06870 262 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 CTAGE8P0CG41 777 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 CPN1P15169 458 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 PIK3R1P27986 724 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 PTH2RP49190 550 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 GFRA1P56159 465 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 CLDN15P56746 228 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 NRG3P56975 720 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 GPX6P59796 221 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 PLCXD2Q0VAA5 305 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 SGO1Q5FBB7 561 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 C10orf62Q5T681 223 aaPredicted RBP13.44□□□□□ -0.26
USB1-214ENST00000568848 OR52E8Q6IFG1 317 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 RAPH1Q70E73 1250 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 RPS27LQ71UM5 84 aaKnown RBP13.44□□□□□ -0.26
USB1-214ENST00000568848 GOLGA7Q7Z5G4 137 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 IFNEQ86WN2 208 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 CTAGE4Q8IX94 777 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 CTAGE3PQ8IX95 158 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 LRRC75A-AS1Q8N1F1 130 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 UBTD2Q8WUN7 234 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 WNT2BQ93097 391 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 LRRC39Q96DD0 335 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 MRRFQ96E11 262 aaKnown RBP13.44□□□□□ -0.26
USB1-214ENST00000568848 TSPAN17Q96FV3 270 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 SFXN2Q96NB2 322 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 TM9SF2Q99805 663 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 PELOQ9BRX2 385 aaKnown RBP13.44□□□□□ -0.26
USB1-214ENST00000568848 MED18Q9BUE0 208 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 MRPL1Q9BYD6 325 aaKnown RBP13.44□□□□□ -0.26
USB1-214ENST00000568848 DPH5Q9H2P9 285 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 TAS2R10Q9NYW0 307 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 RNF14Q9UBS8 474 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 ANGPTL3Q9Y5C1 460 aa13.44□□□□□ -0.26
USB1-214ENST00000568848 TCRBV9S1A1TA0A576 114 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 EFCAB8A8MWE9 144 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 CCDC188H7C350 402 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 KERAO60938 352 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 CBX7O95931 251 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 CPMP14384 443 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 PIK3CBP42338 1070 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 CAPRIN1Q14444 709 aaKnown RBP13.43□□□□□ -0.26
USB1-214ENST00000568848 PFKFB4Q16877 469 aa13.43□□□□□ -0.26
USB1-214ENST00000568848 TRMT12Q53H54 448 aaKnown RBP13.43□□□□□ -0.26
USB1-214ENST00000568848 CDKL4Q5MAI5 379 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms