RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 IDSP22304 550 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 NCBP2P52298 156 aaKnown RBP eCLIP10.33□□□□□ -0.763e-6■■□□□ 14.4
PALB2-206ENST00000568219 ZNF311Q5JNZ3 666 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 FAM27D1Q5T7N8 215 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 ALG1LQ6GMV1 187 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 FAM198BQ6UWH4 519 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 GPR155Q7Z3F1 870 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 GPR135Q8IZ08 494 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 TCTE3Q8IZS6 198 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 CYB561A3Q8NBI2 242 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 OR8S1Q8NH09 359 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 MYLIPQ8WY64 445 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 NEIL2Q969S2 332 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 TRIM43Q96BQ3 446 aaPredicted RBP10.33□□□□□ -0.76
PALB2-206ENST00000568219 SFXN2Q96NB2 322 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 F2RL3Q96RI0 385 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 GPR62Q9BZJ7 368 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 B4GALT6Q9UBX8 382 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 EDARQ9UNE0 448 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 EXOSC1Q9Y3B2 195 aaKnown RBP10.33□□□□□ -0.76
PALB2-206ENST00000568219 AK6Q9Y3D8 172 aaKnown RBP10.33□□□□□ -0.76
PALB2-206ENST00000568219 SHANK3Q9BYB0 1731 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 NPIPB15A6NHN6 443 aaPredicted RBP10.33□□□□□ -0.76
PALB2-206ENST00000568219 LRRN3E7EW58 273 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 H7C4K7 107 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 TOR1AO14656 332 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 ATG13O75143 517 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 RP2O75695 350 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 RPP14O95059 124 aaKnown RBP10.33□□□□□ -0.76
PALB2-206ENST00000568219 ALDH1A1P00352 501 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 GNSP15586 552 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 NUDT1P36639 197 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 OPCMLQ14982 345 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 SYPL1Q16563 259 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 AANATQ16613 207 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 CCSMST1Q4G0I0 132 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 Q6ZVU0 165 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 LILRA3Q8N6C8 439 aaPredicted RBP10.33□□□□□ -0.76
PALB2-206ENST00000568219 ZNF740Q8NDX6 193 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 OR5J2Q8NH18 312 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 OR8K3Q8NH51 312 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 OR51A7Q8NH64 312 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 SLC7A13Q8TCU3 470 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 UROC1Q96N76 676 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 SLC12A9Q9BXP2 914 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 SLC6A16Q9GZN6 736 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 LRRN3Q9H3W5 708 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 POT1Q9NUX5 634 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 FBXL3Q9UKT7 428 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 FKBP7Q9Y680 259 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 CENPFP49454 3210 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 FAM86C2PA6NEL3 165 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 MAP2K6P52564 334 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 LIPJQ5W064 366 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 FRRS1Q6ZNA5 592 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 C17orf64Q86WR6 236 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 OTUB2Q96DC9 234 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.33□□□□□ -0.76
PALB2-206ENST00000568219 SLC6A15Q9H2J7 730 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 MIXL1Q9H2W2 232 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 SUV39H2Q9H5I1 410 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 MED20Q9H944 212 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 RDH14Q9HBH5 336 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 TRIM36Q9NQ86 728 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 TAS2R10Q9NYW0 307 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 TRAPPC4Q9Y296 219 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 OR10H1Q9Y4A9 318 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 PCM1Q15154 2024 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 DISC1C4P0D8 188 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 TNFRSF10BO14763 440 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 AKR1A1P14550 325 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 SNRPBP14678 240 aaKnown RBP10.32□□□□□ -0.76
PALB2-206ENST00000568219 RAB3BP20337 219 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 GATMP50440 423 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 HAGHLQ6PII5 290 aaPredicted RBP10.32□□□□□ -0.76
PALB2-206ENST00000568219 WDR53Q7Z5U6 358 aaPredicted RBP10.32□□□□□ -0.76
PALB2-206ENST00000568219 SIAH3Q8IW03 269 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 OR6K6Q8NGW6 343 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 ADAMTS15Q8TE58 950 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 ADAMTS19Q8TE59 1207 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 TSNAXQ99598 290 aaKnown RBP10.32□□□□□ -0.76
PALB2-206ENST00000568219 TMEM43Q9BTV4 400 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 REV1Q9UBZ9 1251 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 FLVCR2Q9UPI3 526 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 NHSL1Q5SYE7 1610 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 A0A0B4J203 849 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 MTMR11A4FU01 709 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 PSMD9O00233 223 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 YY2O15391 372 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 ETHE1O95571 254 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 ALPPP05187 535 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 CXCL3P19876 107 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 GCGRP47871 477 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 COL28A1Q2UY09 1125 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 TCTE1Q5JU00 501 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 CLVS2Q5SYC1 327 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 LIN54Q6MZP7 749 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 SLC51BQ86UW2 128 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 CCDC116Q8IYX3 515 aa10.32□□□□□ -0.76
PALB2-206ENST00000568219 ACBD7Q8N6N7 88 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms