RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 A0A1W2PNV4 684 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 TCRBV9S1A1TA0A576 114 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 EFCAB8A8MWE9 144 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 A8MXE2 369 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 PLOD2O00469 737 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 CTIFO43310 598 aaKnown RBP14.05□□□□□ -0.16
PALB2-205ENST00000567003 UGT2B11O75310 529 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 TNFSF13O75888 250 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 TGM6O95932 706 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 MTHFD2P13995 350 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 S1PR1P21453 382 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 LHX2P50458 406 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 XKP51811 444 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 IRF9Q00978 393 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 VWA1Q6PCB0 445 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 NUDT13Q86X67 352 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 LRRC75A-AS1Q8N1F1 130 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 WDSUB1Q8N9V3 476 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 PYROXD1Q8WU10 500 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 WNT2BQ93097 391 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 NXNL1Q96CM4 212 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 OMA1Q96E52 524 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 ZFP3Q96NJ6 502 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 HS3ST6Q96QI5 342 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 BRINP2Q9C0B6 783 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 PIGMQ9H3S5 423 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 FETUBQ9UGM5 382 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 NDRG3Q9UGV2 375 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 PACSIN3Q9UKS6 424 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 RAI1Q7Z5J4 1906 aaPredicted RBP14.05□□□□□ -0.16
PALB2-205ENST00000567003 USF3Q68DE3 2245 aa14.05□□□□□ -0.16
PALB2-205ENST00000567003 CUBNO60494 3623 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 MXRA5Q9NR99 2828 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 PRAMEF25A6NGN4 478 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 FAM159BA6NKW6 160 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 C17orf51A8MQB3 221 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 SMNDC1O75940 238 aaKnown RBP eCLIP14.04□□□□□ -0.16
PALB2-205ENST00000567003 CPMP14384 443 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 CCKARP32238 428 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 GCKP35557 465 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 DIO3P55073 304 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 PHEXP78562 749 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 DUSP2Q05923 314 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 PLCXD2Q0VAA5 305 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 MGAT2Q10469 447 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 C6orf163Q5TEZ5 329 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 LIPJQ5W064 366 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 FAM219BQ5XKK7 198 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 SLC30A6Q6NXT4 461 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 CXXC5Q7LFL8 322 aaKnown RBP14.04□□□□□ -0.16
PALB2-205ENST00000567003 ZNF550Q7Z398 422 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 GRAMD2AQ8IUY3 354 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 CTAGE3PQ8IX95 158 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 OR4K14Q8NGD5 310 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 PPP1R14CQ8TAE6 165 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 WDR20Q8TBZ3 569 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 KCTD4Q8WVF5 259 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 CDKL2Q92772 493 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 CTHRC1Q96CG8 243 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 CDK15Q96Q40 435 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 PIP5K1AQ99755 562 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 OPN3Q9H1Y3 402 aaPredicted RBP14.04□□□□□ -0.16
PALB2-205ENST00000567003 NMRAL1Q9HBL8 299 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 TRPS1Q9UHF7 1281 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 BCAP29Q9UHQ4 241 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 FBXL2Q9UKC9 423 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 TSC22D4Q9Y3Q8 395 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 PCDHGA11Q9Y5H2 935 aa14.04□□□□□ -0.16
PALB2-205ENST00000567003 H0YIV9 168 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 NME6O75414 186 aaPredicted RBP14.03□□□□□ -0.16
PALB2-205ENST00000567003 KLK1P06870 262 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 LTA4HP09960 611 aaKnown RBP14.03□□□□□ -0.16
PALB2-205ENST00000567003 ARFIP1P53367 373 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 GFRA1P56159 465 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 CLDN18P56856 261 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 GPX6P59796 221 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 CUL3Q13618 768 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 ACKR1Q16570 336 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 PFKFB4Q16877 469 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 FAM180BQ6P0A1 224 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 ENPP6Q6UWR7 440 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 NUP54Q7Z3B4 507 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 GOLGA7Q7Z5G4 137 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 TBC1D1Q86TI0 1168 aaPredicted RBP14.03□□□□□ -0.16
PALB2-205ENST00000567003 IFNEQ86WN2 208 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 CNEP1R1Q8N9A8 125 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 C17orf47Q8NEP4 570 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 ADCY4Q8NFM4 1077 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 OR7G1Q8NGA0 311 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 PIGTQ969N2 578 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 ZC3HAV1LQ96H79 300 aaKnown RBP14.03□□□□□ -0.16
PALB2-205ENST00000567003 FAM111AQ96PZ2 611 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 UCN2Q96RP3 112 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 BDH2Q9BUT1 245 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 DPH5Q9H2P9 285 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 TAS2R10Q9NYW0 307 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 HEY2Q9UBP5 337 aa14.03□□□□□ -0.16
PALB2-205ENST00000567003 EXO1Q9UQ84 846 aaKnown RBP14.03□□□□□ -0.16
PALB2-205ENST00000567003 PLLPQ9Y342 182 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms