RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 VTCN1Q7Z7D3 282 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 FJX1Q86VR8 437 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 PARGQ86W56 976 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 TGIF2LXQ8IUE1 241 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 SYCE1Q8N0S2 351 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 PGBD5Q8N414 524 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 TCEANCQ8N8B7 351 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 NEXN-AS1Q8NBZ9 246 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 OR7A2PQ8NGA2 310 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 MAGEC3Q8TD91 643 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 ST8SIA1Q92185 356 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 TANKQ92844 425 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 MRPL24Q96A35 216 aaKnown RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 UPRTQ96BW1 309 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC25A36Q96CQ1 311 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 HAVCR1Q96D42 359 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 NRBF2Q96F24 287 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 COQ2Q96H96 371 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 C4orf45Q96LM5 186 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 TGM7Q96PF1 710 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 ACCSQ96QU6 501 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 COPS8Q99627 209 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 TIMP4Q99727 224 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 NEURL2Q9BR09 285 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 TDRD1Q9BXT4 1180 aaKnown RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 LAT2Q9GZY6 243 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 CSTL1Q9H114 145 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 IL1RL2Q9HB29 575 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC25A19Q9HC21 320 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 MCCC2Q9HCC0 563 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 S100A14Q9HCY8 104 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 FZD3Q9NPG1 666 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 C2orf42Q9NWW7 574 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 KLHL28Q9NXS3 571 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 AHSPQ9NZD4 102 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 IL36RNQ9UBH0 155 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 GNG12Q9UBI6 72 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 C19orf25Q9UFG5 118 aaPredicted RBP2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 IL36AQ9UHA7 158 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNHIT2Q9UHR6 403 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 ADAM28Q9UKQ2 775 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 ANGPTL2Q9UKU9 493 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 EMCNQ9ULC0 261 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 TBC1D24Q9ULP9 559 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 RPH3ALQ9UNE2 315 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC9A8Q9Y2E8 581 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 KLHDC2Q9Y2U9 406 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 MAD1L1Q9Y6D9 718 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 BCORL1Q5H9F3 1711 aa2.99□□□□□ -1.93
HERPUD1-211ENST00000566550 TRBV4-1A0A0J9YWV2 114 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SMCO3A2RU48 225 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 FAM74A7A6NL05 159 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SHISA7A6NL88 538 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SRRM4A7MD48 611 aaKnown RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 WASHC1A8K0Z3 465 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 A8MU76 341 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SNURFLB1AK76 121 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF879B4DU55 563 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 C9JVG2 144 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 E9PMD0 336 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 H3BTX0 84 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SGK494L7N484 410 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 CASKO14936 926 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 ARPC1BO15143 372 aaKnown RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 N4BP1O75113 896 aaKnown RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 E2F6O75461 281 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 UPK3AO75631 287 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 LRATO95237 230 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 TSPAN12O95859 305 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SYF2O95926 243 aaKnown RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 TGM6O95932 706 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 MBP02144 154 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 FTH1P02794 183 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 GM2AP17900 193 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 WT1P19544 449 aaPredicted RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 PPP2R1BP30154 601 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 CASP14P31944 242 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 HPCAL1P37235 193 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 ABCG1P45844 678 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 STARP49675 285 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 RASSF2P50749 326 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 NDST1P52848 882 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 ATP1B3P54709 279 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 C21orf59P57076 290 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 RGS8P57771 180 aaPredicted RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 KRTAP10-11P60412 298 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 XIAPP98170 497 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 EWSR1Q01844 656 aaKnown RBP eCLIP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 PEX6Q13608 980 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 EXT1Q16394 746 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 KLHL40Q2TBA0 621 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 FAM74A3Q4VXF1 159 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC25A53Q5H9E4 307 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 FGD3Q5JSP0 725 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 BEND6Q5SZJ8 279 aaPredicted RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 DDI2Q5TDH0 399 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 AGAP7PQ5VUJ5 663 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 PLCXD3Q63HM9 321 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 PNCKQ6P2M8 343 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 TMEM107Q6UX40 140 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms