RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 AGFG1P52594 562 aaKnown RBP7.82□□□□□ -1.16
CAPN3-213ENST00000565173 MAPK12P53778 367 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 NRG3P56975 720 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 EXOSC7Q15024 291 aaKnown RBP7.82□□□□□ -1.16
CAPN3-213ENST00000565173 TRMT12Q53H54 448 aaKnown RBP7.82□□□□□ -1.16
CAPN3-213ENST00000565173 SGO1Q5FBB7 561 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 FAM180BQ6P0A1 224 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 LETMD1Q6P1Q0 360 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 PAGE2Q7Z2X7 111 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 NUP54Q7Z3B4 507 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 MILR1Q7Z6M3 343 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 ADGRE4PQ86SQ3 457 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 YRDCQ86U90 279 aaKnown RBP7.82□□□□□ -1.16
CAPN3-213ENST00000565173 WDSUB1Q8N9V3 476 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 C9orf106Q8NAJ2 232 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 ADCY4Q8NFM4 1077 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 OR1J4Q8NGS1 313 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 LINC01560Q8TB33 94 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 ZPLD1Q8TCW7 415 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 ZNF483Q8TF39 744 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-213ENST00000565173 MBD6Q96DN6 1003 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 HSPBAP1Q96EW2 488 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 CNRIP1Q96F85 164 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-213ENST00000565173 RMND5BQ96G75 393 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-213ENST00000565173 TRIB1Q96RU8 372 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 G6PC3Q9BUM1 346 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 C1QTNF3Q9BXJ4 246 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 ITPAQ9BY32 194 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 GALNT9Q9HCQ5 603 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 DLL4Q9NR61 685 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 XPR1Q9UBH6 696 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 MTRF1LQ9UGC7 380 aaKnown RBP7.82□□□□□ -1.16
CAPN3-213ENST00000565173 CAMK2AQ9UQM7 478 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 PLEKHA6Q9Y2H5 1048 aa7.82□□□□□ -1.16
CAPN3-213ENST00000565173 TUBAL3A6NHL2 446 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 B4DXG7 233 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 KIF2AO00139 706 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-213ENST00000565173 ACOX3O15254 700 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 CDH16O75309 829 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 UGT2B11O75310 529 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 URI1O94763 535 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-213ENST00000565173 IL18BPO95998 194 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 ACTL6AO96019 429 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 RHOXF2BP0C7M4 288 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 CTAGE8P0CG41 777 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 COL6A2P12110 1019 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 TSPAN8P19075 237 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 KLK2P20151 261 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 DRD5P21918 477 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 TACR1P25103 407 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 PHBP35232 272 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 PPICP45877 212 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 CDH13P55290 713 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 GFRA1P56159 465 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 ADAM8P78325 824 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 RPP38P78345 283 aaKnown RBP7.81□□□□□ -1.16
CAPN3-213ENST00000565173 FOXF2Q12947 444 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 FOXD4Q12950 439 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-213ENST00000565173 IFT88Q13099 833 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 SNTA1Q13424 505 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 TOMM20Q15388 145 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 SF3B4Q15427 424 aaKnown RBP eCLIP7.81□□□□□ -1.16
CAPN3-213ENST00000565173 NNATQ16517 81 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 TTC19Q6DKK2 380 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-213ENST00000565173 SLC30A6Q6NXT4 461 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 ANGPTL8Q6UXH0 198 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 CTAGE4Q8IX94 777 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 CHDHQ8NE62 594 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-213ENST00000565173 OR52R1Q8NGF1 315 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 GOT1L1Q8NHS2 421 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-213ENST00000565173 RNF138Q8WVD3 245 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 OMA1Q96E52 524 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 LCORQ96JN0 433 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-213ENST00000565173 ALPK1Q96QP1 1244 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 UCN2Q96RP3 112 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 TUBA1CQ9BQE3 449 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 BRINP2Q9C0B6 783 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 ELOVL6Q9H5J4 265 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 METTL7AQ9H8H3 244 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 PLEKHF2Q9H8W4 249 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 BRF2Q9HAW0 419 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 EHD3Q9NZN3 535 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 HEY2Q9UBP5 337 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 BCAP29Q9UHQ4 241 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 TMCO1Q9UM00 188 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 SLC12A4Q9UP95 1085 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 EXO1Q9UQ84 846 aaKnown RBP7.81□□□□□ -1.16
CAPN3-213ENST00000565173 CFL2Q9Y281 166 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 RPH3AQ9Y2J0 694 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-213ENST00000565173 GPR55Q9Y2T6 319 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-213ENST00000565173 PLLPQ9Y342 182 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 MPDZO75970 2070 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 MED12Q93074 2177 aa7.81□□□□□ -1.16
CAPN3-213ENST00000565173 ABCA4P78363 2273 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 A0A1W2PPR1 153 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 FRG2CA6NGY1 282 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 GOLGA6L10A6NI86 522 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 TO15178 435 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 SMIM24O75264 130 aa7.8□□□□□ -1.16
CAPN3-213ENST00000565173 GUCY1B2O75343 617 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms