RNA–Protein interactions for RNA: ENST00000565167.1

RPAP1-208, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 1,712 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-208ENST00000565167 CCDC88CQ9P219 2028 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 IGLV3-12A0A075B6K2 115 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 IGKV3D-11A0A0A0MRZ8 115 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 RFPL3O75679 317 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 CBX7O95931 251 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 MT-ND1P03886 318 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 IFNA16P05015 189 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 RORAP35398 523 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 DCDP81605 110 aaKnown RBP13.33□□□□□ -0.28
RPAP1-208ENST00000565167 RHAGQ02094 409 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 LRRC36Q1X8D7 754 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 MINDY4Q4G0A6 757 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 EXOSC6Q5RKV6 272 aaKnown RBP13.33□□□□□ -0.28
RPAP1-208ENST00000565167 MFSD4BQ5TF39 518 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 ZNF385CQ66K41 422 aaPredicted RBP13.33□□□□□ -0.28
RPAP1-208ENST00000565167 ZCCHC12Q6PEW1 402 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 FKBP9P1Q75LS8 142 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 WDR53Q7Z5U6 358 aaPredicted RBP13.33□□□□□ -0.28
RPAP1-208ENST00000565167 CENPNQ96H22 339 aaPredicted RBP13.33□□□□□ -0.28
RPAP1-208ENST00000565167 DOHHQ9BU89 302 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 BCL2L10Q9HD36 194 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 LIPT1Q9Y234 373 aa13.33□□□□□ -0.28
RPAP1-208ENST00000565167 SPEGQ15772 3267 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 FAM149AA5PLN7 773 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 PEX1O43933 1283 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 RECKO95980 971 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 AGR2O95994 175 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 LDLRP01130 860 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 TNNI3P19429 210 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 PEX2P28328 305 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 INSM1Q01101 510 aaPredicted RBP13.32□□□□□ -0.28
RPAP1-208ENST00000565167 FUT5Q11128 374 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 GNA13Q14344 377 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 ZNF267Q14586 743 aaPredicted RBP13.32□□□□□ -0.28
RPAP1-208ENST00000565167 ATP6AP1Q15904 470 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 RPS26P11Q5JNZ5 115 aaPredicted RBP13.32□□□□□ -0.28
RPAP1-208ENST00000565167 ATAD3BQ5T9A4 648 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 VTCN1Q7Z7D3 282 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 PIP4P1Q86T03 277 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 PLPP5Q8NEB5 264 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 STT3BQ8TCJ2 826 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 SLC9A6Q92581 669 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 TPD52L3Q96J77 140 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 HSH2DQ96JZ2 352 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 ZNF578Q96N58 590 aaPredicted RBP13.32□□□□□ -0.28
RPAP1-208ENST00000565167 CMKLR1Q99788 373 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 TREX2Q9BQ50 279 aaPredicted RBP13.32□□□□□ -0.28
RPAP1-208ENST00000565167 KLHL4Q9C0H6 718 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 VCX3BQ9H321 246 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 PIGUQ9H490 435 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 IL1RAPQ9NPH3 570 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 GIN1Q9NXP7 522 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 AKAP7Q9P0M2 348 aaPredicted RBP13.32□□□□□ -0.28
RPAP1-208ENST00000565167 CTSFQ9UBX1 484 aa13.32□□□□□ -0.28
RPAP1-208ENST00000565167 A0A0G2JPF8 293 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 HNRNPCL2B2RXH8 293 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 B4E171 279 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 HNRNPCL3B7ZW38 293 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 TMX2-CTNND1H3BSU7 103 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 HRKO00198 91 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 CLOCKO15516 846 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 PDE9AO76083 593 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 OPN1SWP03999 348 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 SEMG1P04279 462 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 HNRNPCL4P0DMR1 293 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 ACP2P11117 423 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 MAP3K8P41279 467 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 TSPAN7P41732 249 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 EFNA3P52797 238 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 CRISP3P54108 245 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 KCNJ10P78508 379 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 OCA2Q04671 838 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 FUT7Q11130 342 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 DUSP8Q13202 625 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 DUSP5Q16690 384 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 PRAMEF8Q5VWM4 474 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 PRAMEF7Q5VXH5 474 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 CDCP2Q5VXM1 449 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 HEPHL1Q6MZM0 1159 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 OVCH1Q7RTY7 1134 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 PRSS58Q8IYP2 241 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 CDRT4Q8N9R6 151 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 OR52R1Q8NGF1 315 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 PTPMT1Q8WUK0 201 aaPredicted RBP13.31□□□□□ -0.28
RPAP1-208ENST00000565167 LZICQ8WZA0 190 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 TRNT1Q96Q11 434 aaKnown RBP13.31□□□□□ -0.28
RPAP1-208ENST00000565167 ZNF607Q96SK3 696 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 RUBCNLQ9H714 662 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 EXD2Q9NVH0 621 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 SLC39A1Q9NY26 324 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 MKL2Q9ULH7 1088 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 PCDHGA1Q9Y5H4 931 aa13.31□□□□□ -0.28
RPAP1-208ENST00000565167 TCRBV16S1A1N1A0A5B0 115 aa13.3□□□□□ -0.28
RPAP1-208ENST00000565167 C17orf105B2RV13 164 aa13.3□□□□□ -0.28
RPAP1-208ENST00000565167 MEN1O00255 615 aa13.3□□□□□ -0.28
RPAP1-208ENST00000565167 FOXD2O60548 495 aaPredicted RBP13.3□□□□□ -0.28
RPAP1-208ENST00000565167 CPNE3O75131 537 aaKnown RBP13.3□□□□□ -0.28
RPAP1-208ENST00000565167 COQ9O75208 318 aa13.3□□□□□ -0.28
RPAP1-208ENST00000565167 DEAF1O75398 565 aaPredicted RBP13.3□□□□□ -0.28
RPAP1-208ENST00000565167 MFN2O95140 757 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms