RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 MAPK12P53778 367 aa12.96□□□□□ -0.33
COMMD4-211ENST00000564815 NKX6-1P78426 367 aaPredicted RBP12.96□□□□□ -0.33
COMMD4-211ENST00000564815 LTBQ06643 244 aa12.96□□□□□ -0.33
COMMD4-211ENST00000564815 MAP4K2Q12851 820 aa12.96□□□□□ -0.33
COMMD4-211ENST00000564815 MROH9Q5TGP6 573 aa12.96□□□□□ -0.33
COMMD4-211ENST00000564815 FNDC7Q5VTL7 733 aa12.96□□□□□ -0.33
COMMD4-211ENST00000564815 FRG2Q64ET8 278 aa12.96□□□□□ -0.33
COMMD4-211ENST00000564815 PRR22Q8IZ63 422 aa12.96□□□□□ -0.33
COMMD4-211ENST00000564815 VWA5B2Q8N398 1253 aa12.96□□□□□ -0.33
COMMD4-211ENST00000564815 NTNG2Q96CW9 530 aa12.96□□□□□ -0.33
COMMD4-211ENST00000564815 FRG2BQ96QU4 278 aa12.96□□□□□ -0.33
COMMD4-211ENST00000564815 OSBPL11Q9BXB4 747 aa12.96□□□□□ -0.33
COMMD4-211ENST00000564815 BRINP2Q9C0B6 783 aa12.96□□□□□ -0.33
COMMD4-211ENST00000564815 RAB17Q9H0T7 212 aa12.96□□□□□ -0.33
COMMD4-211ENST00000564815 NOL11Q9H8H0 719 aaKnown RBP12.96□□□□□ -0.33
COMMD4-211ENST00000564815 A0A096LPK6 155 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 SH3D21A4FU49 640 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 KDM4EB2RXH2 506 aaPredicted RBP12.95□□□□□ -0.34
COMMD4-211ENST00000564815 SNPHO15079 494 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 BCAS2O75934 225 aaPredicted RBP12.95□□□□□ -0.34
COMMD4-211ENST00000564815 RBP1P09455 135 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 CT62P0C5K7 136 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 DRD5P21918 477 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 GPX3P22352 226 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 GMPRP36959 345 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 MRPS25P82663 173 aaKnown RBP12.95□□□□□ -0.34
COMMD4-211ENST00000564815 SRYQ05066 204 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 PLCXD2Q0VAA5 305 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 LUZP2Q86TE4 346 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 P3H2Q8IVL5 708 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 TRIM42Q8IWZ5 723 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 C9orf106Q8NAJ2 232 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 WFDC11Q8NEX6 87 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 SMPDL3BQ92485 455 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 INTS12Q96CB8 462 aaKnown RBP12.95□□□□□ -0.34
COMMD4-211ENST00000564815 OMA1Q96E52 524 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 UCN2Q96RP3 112 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 NTMT1Q9BV86 223 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 FAIM2Q9BWQ8 316 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 NXF5Q9H1B4 397 aaKnown RBP12.95□□□□□ -0.34
COMMD4-211ENST00000564815 ELOVL6Q9H5J4 265 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 PCDHA9Q9Y5H5 950 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 ZNF780BQ9Y6R6 833 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 NCKAP5O14513 1909 aa12.95□□□□□ -0.34
COMMD4-211ENST00000564815 RAD51CO43502 376 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 ABCB7O75027 752 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 SMIM24O75264 130 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 ERAL1O75616 437 aaKnown RBP12.94□□□□□ -0.34
COMMD4-211ENST00000564815 HRGP04196 525 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 KRT20P35900 424 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 PPICP45877 212 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 PSPHP78330 225 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 CLEC9AQ6UXN8 241 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 TAOK1Q7L7X3 1001 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 P4HA3Q7Z4N8 544 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 MILR1Q7Z6M3 343 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 IFNEQ86WN2 208 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 CENPLQ8N0S6 344 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-211ENST00000564815 SPATA4Q8NEY3 305 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 PIGTQ969N2 578 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 TUBA1CQ9BQE3 449 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 OR2B2Q9GZK3 357 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 ZNF395Q9H8N7 513 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-211ENST00000564815 SERHLQ9NQF3 203 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 TAS2R10Q9NYW0 307 aa12.94□□□□□ -0.34
COMMD4-211ENST00000564815 PRAMEF25A6NGN4 478 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 REM1O75628 298 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 SIX3O95343 332 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-211ENST00000564815 ATP1B1P05026 303 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 S1PR1P21453 382 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 PHBP35232 272 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 FEN1P39748 380 aaKnown RBP12.93□□□□□ -0.34
COMMD4-211ENST00000564815 SERPINB8P50452 374 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 MRPS22P82650 360 aaKnown RBP12.93□□□□□ -0.34
COMMD4-211ENST00000564815 IRF9Q00978 393 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 POU4F3Q15319 338 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 UAP1Q16222 522 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-211ENST00000564815 PRICKLE4Q2TBC4 344 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 SGO1Q5FBB7 561 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 OR2A2Q6IF42 318 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 SLC48A1Q6P1K1 146 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 PLCZ1Q86YW0 608 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 GRAMD2AQ8IUY3 354 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 METTL4Q8N3J2 472 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 PTGR2Q8N8N7 351 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-211ENST00000564815 ADCY4Q8NFM4 1077 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 RDH11Q8TC12 318 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 HGDQ93099 445 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 MRRFQ96E11 262 aaKnown RBP12.93□□□□□ -0.34
COMMD4-211ENST00000564815 PHF21BQ96EK2 531 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 COL21A1Q96P44 957 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 CDK15Q96Q40 435 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 NODALQ96S42 347 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 LRRC1Q9BTT6 524 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 VPS11Q9H270 941 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 GALNT8Q9NY28 637 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 ZNF226Q9NYT6 803 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 GRHL1Q9NZI5 618 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 PACSIN3Q9UKS6 424 aa12.93□□□□□ -0.34
COMMD4-211ENST00000564815 SNX6Q9UNH7 406 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms