RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 STMN3Q9NZ72 180 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 HEMK1Q9Y5R4 338 aaPredicted RBP11.55□□□□□ -0.56
KARS-204ENST00000564578 SNX8Q9Y5X2 465 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 A0A1W2PP18 115 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 CCDC154A6NI56 674 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 MKRN2OSH3BPM6 223 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 WWP2O00308 870 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 NR5A2O00482 541 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 CFLARO15519 480 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 BCAS2O75934 225 aaPredicted RBP11.54□□□□□ -0.56
KARS-204ENST00000564578 OR2J2O76002 312 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 MAP3K8P41279 467 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 CCT3P49368 545 aaKnown RBP11.54□□□□□ -0.56
KARS-204ENST00000564578 KCNK10P57789 538 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 MLF1P58340 268 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 PSG6Q00889 435 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 GAB1Q13480 694 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 MAPKAPK3Q16644 382 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 PAGE3Q5JUK9 113 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 SLC2A7Q6PXP3 512 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 ISLR2Q6UXK2 745 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 TMEM64Q6YI46 380 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 LINC00696Q6ZRV3 163 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 OR4A15Q8NGL6 344 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 OR5AK3PQ8NH89 298 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 HOXB13Q92826 284 aaPredicted RBP11.54□□□□□ -0.56
KARS-204ENST00000564578 PANX1Q96RD7 426 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 CCDC106Q9BWC9 280 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 ITPAQ9BY32 194 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 SLAMF8Q9P0V8 285 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 ARL2BPQ9Y2Y0 163 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 C2orf92A0A1B0GVN3 265 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 EMC8O43402 210 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 CCDC22O60826 627 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 ITGA10O75578 1167 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 CPSF4O95639 269 aaKnown RBP11.54□□□□□ -0.56
KARS-204ENST00000564578 GSNP06396 782 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 CT45A8P0DMV1 189 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 CT45A9P0DMV2 189 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 HOXB9P17482 250 aaPredicted RBP11.54□□□□□ -0.56
KARS-204ENST00000564578 ADSLP30566 484 aaPredicted RBP11.54□□□□□ -0.56
KARS-204ENST00000564578 CD97P48960 835 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 PRKAG1P54619 331 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 CORO7P57737 925 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 KCNAB2Q13303 367 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 CT45A2Q5DJT8 189 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 C1QTNF12Q5T7M4 302 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 ZNF468Q5VIY5 522 aaPredicted RBP11.54□□□□□ -0.56
KARS-204ENST00000564578 MSANTD1Q6ZTZ1 278 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 SLC29A4Q7RTT9 530 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 WDR53Q7Z5U6 358 aaPredicted RBP11.54□□□□□ -0.56
KARS-204ENST00000564578 RETREG3Q86VR2 466 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 LGI4Q8N135 537 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 ANKS4BQ8N8V4 417 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 NUP43Q8NFH3 380 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 OR5L2Q8NGL0 311 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 TSPEARQ8WU66 669 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 GAL3ST4Q96RP7 486 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 NXF5Q9H1B4 397 aaKnown RBP11.54□□□□□ -0.56
KARS-204ENST00000564578 C3orf14Q9HBI5 128 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 ZCCHC3Q9NUD5 404 aaKnown RBP11.54□□□□□ -0.56
KARS-204ENST00000564578 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.54□□□□□ -0.56
KARS-204ENST00000564578 GPATCH2Q9NW75 528 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 PCDHGB4Q9UN71 923 aa11.54□□□□□ -0.56
KARS-204ENST00000564578 GPR55Q9Y2T6 319 aaPredicted RBP11.54□□□□□ -0.56
KARS-204ENST00000564578 TNRC6AQ8NDV7 1962 aaKnown RBP11.53□□□□□ -0.56
KARS-204ENST00000564578 ERVH48-1M5A8F1 160 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 FBP2O00757 339 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 RFXANKO14593 260 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 NADKO95544 446 aaPredicted RBP11.53□□□□□ -0.56
KARS-204ENST00000564578 HMGN2P05204 90 aaKnown RBP11.53□□□□□ -0.56
KARS-204ENST00000564578 SNRPB2P08579 225 aaKnown RBP11.53□□□□□ -0.56
KARS-204ENST00000564578 LRRC74AQ0VAA2 488 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 MFAP5Q13361 173 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 NNATQ16517 81 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 MEP1AQ16819 746 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 PIGGQ5H8A4 983 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 EXOSC6Q5RKV6 272 aaKnown RBP11.53□□□□□ -0.56
KARS-204ENST00000564578 GKAP1Q5VSY0 366 aaPredicted RBP11.53□□□□□ -0.56
KARS-204ENST00000564578 IRAK1BP1Q5VVH5 260 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 NPSR1Q6W5P4 371 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 TREML1Q86YW5 311 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 BEST3Q8N1M1 668 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 C17orf47Q8NEP4 570 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 TP53INP1Q96A56 240 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 C16orf58Q96GQ5 468 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 ZNF354BQ96LW1 612 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 BTBD9Q96Q07 612 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 LMF1Q96S06 567 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 RASL10BQ96S79 203 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 PAIP1Q9H074 479 aaKnown RBP11.53□□□□□ -0.56
KARS-204ENST00000564578 EPS8L2Q9H6S3 715 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 FOLH1BQ9HBA9 442 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 EQTNQ9NQ60 294 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 MRGBPQ9NV56 204 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 PRODH2Q9UF12 536 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 TEKT2Q9UIF3 430 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 TUBD1Q9UJT1 453 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 CFL2Q9Y281 166 aa11.53□□□□□ -0.56
KARS-204ENST00000564578 TP53TG5Q9Y2B4 290 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 270.6 ms