RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 PRODH2Q9UF12 536 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 ITGB1BP2Q9UKP3 347 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 STK38LQ9Y2H1 464 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 EXPH5Q8NEV8 1989 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 C15orf38-AP3S2A0A0A6YYH1 394 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 SERTM1A2A2V5 107 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 ERAL1O75616 437 aaKnown RBP15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 TRAPPC6AO75865 159 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 SUPT7LO94864 414 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 KRT15P19012 456 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 ATP5F1P24539 256 aaPredicted RBP15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 MASP1P48740 699 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 EMDP50402 254 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 PRKAA2P54646 552 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 CEBPEQ15744 281 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 NSUN5P2Q63ZY6 315 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 GALNT18Q6P9A2 607 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 ARSKQ6UWY0 536 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 PRR22Q8IZ63 422 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 SAMD14Q8IZD0 417 aaPredicted RBP15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 CDYL2Q8N8U2 506 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 ACMSDQ8TDX5 336 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 ZNF592Q92610 1267 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 L3HYPDHQ96EM0 354 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 TMEM237Q96Q45 408 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 ITPAQ9BY32 194 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 BRINP2Q9C0B6 783 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 SIRT5Q9NXA8 310 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 HEY2Q9UBP5 337 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 NFU1Q9UMS0 254 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 ZNF780BQ9Y6R6 833 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 ARHGAP21Q5T5U3 1957 aa15.73■□□□□ 0.11
VPS9D1-203ENST00000563798 FAM221AA4D161 298 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 FRG2CA6NGY1 282 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 CD8B2A6NJW9 211 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 KIF2AO00139 706 aaPredicted RBP15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 RIPK2O43353 540 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 ULK1O75385 1050 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 BCAS2O75934 225 aaPredicted RBP15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 GSTA1P08263 222 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 BMP7P18075 431 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 PTGDSP41222 190 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 PSPHP78330 225 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 RAE1P78406 368 aaKnown RBP15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 EXOSC7Q15024 291 aaKnown RBP15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 TRMT12Q53H54 448 aaKnown RBP15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 ZNF628Q5EBL2 1059 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 TCHHL1Q5QJ38 904 aaPredicted RBP15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 TEX35Q5T0J7 233 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 GPRIN3Q6ZVF9 776 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 SLC22A9Q8IVM8 553 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 RELL2Q8NC24 303 aaPredicted RBP15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 NAXEQ8NCW5 288 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 SIMC1Q8NDZ2 872 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 ADCY4Q8NFM4 1077 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 TNIP2Q8NFZ5 429 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 OR52R1Q8NGF1 315 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 OMA1Q96E52 524 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 WDYHV1Q96HA8 205 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 HBEGFQ99075 208 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 UGT2B28Q9BY64 529 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 TXLNGYQ9BZA5 131 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 SHCBP1LQ9BZQ2 653 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 METTL7AQ9H8H3 244 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 BCAP29Q9UHQ4 241 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 UTS2RQ9UKP6 389 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 GPR55Q9Y2T6 319 aaPredicted RBP15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 PLLPQ9Y342 182 aa15.72■□□□□ 0.11
VPS9D1-203ENST00000563798 DVL2O14641 736 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 SNPHO15079 494 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 ICOSLGO75144 302 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 ACTL6AO96019 429 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 ENO1P06733 434 aaKnown RBP15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 CHN1P15882 459 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 GSTM5P46439 218 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 PKNOX1P55347 436 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 PLCXD2Q0VAA5 305 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 LCP2Q13094 533 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 MYBPHQ13203 477 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 SPIN4Q56A73 249 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 WDR53Q7Z5U6 358 aaPredicted RBP15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 IFT20Q8IY31 132 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 OR1J4Q8NGS1 313 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 METTL6Q8TCB7 284 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 MZB1Q8WU39 189 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 BTBD9Q96Q07 612 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 NODALQ96S42 347 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 SH3GL2Q99962 352 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 ACPTQ9BZG2 426 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 CALHM2Q9HA72 323 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 EHD3Q9NZN3 535 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 FOXD3Q9UJU5 478 aaPredicted RBP15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 EXO1Q9UQ84 846 aaKnown RBP15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 DLGAP4Q9Y2H0 992 aa15.71■□□□□ 0.11
VPS9D1-203ENST00000563798 MBD3L4A6NDZ8 208 aaPredicted RBP15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 MBD3L3A6NE82 208 aaPredicted RBP15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 OR6C70A6NIJ9 312 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 MBD3L5A6NJ08 208 aaPredicted RBP15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 GNB5O14775 395 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 ABCB7O75027 752 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms