RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 QPCTLQ9NXS2 382 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 GRID1Q9ULK0 1009 aa16.52■□□□□ 0.24
E4F1-203ENST00000563643 RAI1Q7Z5J4 1906 aaPredicted RBP16.51■□□□□ 0.23
E4F1-203ENST00000563643 A0A0G2JN53 185 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 COPEO14579 308 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 ZNF354AO60765 605 aaPredicted RBP16.51■□□□□ 0.23
E4F1-203ENST00000563643 IMPDH1P20839 514 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 ARL1P40616 181 aaPredicted RBP16.51■□□□□ 0.23
E4F1-203ENST00000563643 MTTPP55157 894 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 FOXF2Q12947 444 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 DDX39BQ13838 428 aaKnown RBP16.51■□□□□ 0.23
E4F1-203ENST00000563643 CLEC12BQ2HXU8 276 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 ZNF678Q5SXM1 525 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 KHDRBS2Q5VWX1 349 aaKnown RBP16.51■□□□□ 0.23
E4F1-203ENST00000563643 OPN5Q6U736 354 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 ZYG11AQ6WRX3 759 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 HSDL2Q6YN16 418 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 RPS27LQ71UM5 84 aaKnown RBP16.51■□□□□ 0.23
E4F1-203ENST00000563643 UBE3DQ7Z6J8 389 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 TRABD2AQ86V40 505 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 C4orf33Q8N1A6 199 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 CA13Q8N1Q1 262 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 ZNF441Q8N8Z8 693 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 WDR20Q8TBZ3 569 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 TMEM171Q8WVE6 324 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 CCDC126Q96EE4 140 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 L3HYPDHQ96EM0 354 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 KCNC2Q96PR1 638 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 CDK15Q96Q40 435 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 TMEM237Q96Q45 408 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 SERINC2Q96SA4 455 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 TBCDQ9BTW9 1192 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 ROGDIQ9GZN7 287 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 CXorf56Q9H5V9 222 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 PRM3Q9NNZ6 103 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 ZNF226Q9NYT6 803 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 CDC42EP3Q9UKI2 254 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 MMACHCQ9Y4U1 282 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 EML6Q6ZMW3 1958 aa16.51■□□□□ 0.23
E4F1-203ENST00000563643 G3V2L1 256 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 FOXE1O00358 373 aaPredicted RBP16.5■□□□□ 0.23
E4F1-203ENST00000563643 B3GALT2O43825 422 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 PLIN3O60664 434 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 SCELO95171 688 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 TGFB1P01137 390 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 MYL2P10916 166 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 MC3RP41968 323 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 CDH13P55290 713 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 CLCQ05315 142 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 RUNX2Q13950 521 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 UNC50Q53HI1 259 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 DEPDC1Q5TB30 811 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 MILR1Q7Z6M3 343 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 C9orf106Q8NAJ2 232 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 RDH11Q8TC12 318 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 MTERF1Q99551 399 aaKnown RBP16.5■□□□□ 0.23
E4F1-203ENST00000563643 SFXN3Q9BWM7 321 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 PLA2G12AQ9BZM1 189 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 OR51B5Q9H339 312 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 COPS7BQ9H9Q2 264 aaPredicted RBP16.5■□□□□ 0.23
E4F1-203ENST00000563643 PRDM7Q9NQW5 492 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 KLHL28Q9NXS3 571 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 PSD3Q9NYI0 1048 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 CAMK2AQ9UQM7 478 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 MGAM2Q2M2H8 2515 aa16.5■□□□□ 0.23
E4F1-203ENST00000563643 SUPT7LO94864 414 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 CRYGSP22914 178 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 PTX3P26022 381 aaPredicted RBP16.49■□□□□ 0.23
E4F1-203ENST00000563643 CPOXP36551 454 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 ARFIP1P53367 373 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 SRSF2Q01130 221 aaKnown RBP16.49■□□□□ 0.23
E4F1-203ENST00000563643 PRAMEF20Q5VT98 475 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 FRG2Q64ET8 278 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 LETMD1Q6P1Q0 360 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 SCUBE1Q8IWY4 988 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 RNF175Q8N4F7 328 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 OR4F6Q8NGB9 312 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 TRPC4APQ8TEL6 797 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 ROBO4Q8WZ75 1007 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 ZBED6CLQ96FA7 236 aaPredicted RBP16.49■□□□□ 0.23
E4F1-203ENST00000563643 APOPT1Q96IL0 206 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 WFIKKN1Q96NZ8 548 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 FRG2BQ96QU4 278 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 ZNF382Q96SR6 550 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 CENPKQ9BS16 269 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 STK38LQ9Y2H1 464 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 NCKAP5O14513 1909 aa16.49■□□□□ 0.23
E4F1-203ENST00000563643 ROS1P08922 2347 aa16.48■□□□□ 0.23
E4F1-203ENST00000563643 TGFBR3LH3BV60 316 aa16.48■□□□□ 0.23
E4F1-203ENST00000563643 PPP6CO00743 305 aa16.48■□□□□ 0.23
E4F1-203ENST00000563643 TSPAN8P19075 237 aa16.48■□□□□ 0.23
E4F1-203ENST00000563643 ATP5A1P25705 553 aaKnown RBP16.48■□□□□ 0.23
E4F1-203ENST00000563643 CERS1P27544 350 aa16.48■□□□□ 0.23
E4F1-203ENST00000563643 NEK2P51955 445 aa16.48■□□□□ 0.23
E4F1-203ENST00000563643 RAP1GDS1P52306 607 aa16.48■□□□□ 0.23
E4F1-203ENST00000563643 RAB38P57729 211 aa16.48■□□□□ 0.23
E4F1-203ENST00000563643 NAA20P61599 178 aa16.48■□□□□ 0.23
E4F1-203ENST00000563643 RPS13P62277 151 aaKnown RBP16.48■□□□□ 0.23
E4F1-203ENST00000563643 ZNF844Q08AG5 666 aa16.48■□□□□ 0.23
E4F1-203ENST00000563643 CUL3Q13618 768 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms