RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 RPL38P63173 70 aaKnown RBP4.36□□□□□ -1.71
CDR2-203ENST00000563573 CCL7P80098 99 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 E2F1Q01094 437 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 C2orf80Q0P641 193 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 FOXF2Q12947 444 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 ILKQ13418 452 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 TUBB3Q13509 450 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 CYLC2Q14093 348 aaPredicted RBP4.36□□□□□ -1.71
CDR2-203ENST00000563573 HEPACAMQ14CZ8 416 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 SF3A2Q15428 464 aaKnown RBP4.36□□□□□ -1.71
CDR2-203ENST00000563573 ZIC1Q15915 447 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 NDUFA9Q16795 377 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 RFTN2Q52LD8 501 aaPredicted RBP4.36□□□□□ -1.71
CDR2-203ENST00000563573 AGKQ53H12 422 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 XKR7Q5GH72 579 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 TOR1AIP1Q5JTV8 583 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 WASHC2DQ5SRD0 308 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 CCNYL2Q5T2Q4 361 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 KHDRBS2Q5VWX1 349 aaKnown RBP4.36□□□□□ -1.71
CDR2-203ENST00000563573 OR4C11Q6IEV9 310 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 TCEAL6Q6IPX3 200 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 GUSBP11Q6P575 273 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 VWA1Q6PCB0 445 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 C6orf89Q6UWU4 347 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 ABHD13Q7L211 337 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 TRIM73Q86UV7 250 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 PLD3Q8IV08 490 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.36□□□□□ -1.71
CDR2-203ENST00000563573 METTL4Q8N3J2 472 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 LIX1Q8N485 282 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 RNF175Q8N4F7 328 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 DNAJC22Q8N4W6 341 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 NATD1Q8N6N6 113 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 TTC29Q8NA56 475 aaPredicted RBP4.36□□□□□ -1.71
CDR2-203ENST00000563573 VPS37AQ8NEZ2 397 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 OR4D9Q8NGE8 314 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 RP9Q8TA86 221 aaKnown RBP4.36□□□□□ -1.71
CDR2-203ENST00000563573 FLVCR1-AS1Q8TAF5 88 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 NT5CQ8TCD5 201 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 CREB3L4Q8TEY5 395 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 TCEAL3Q969E4 200 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 TM4SF19Q96DZ7 209 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 APIPQ96GX9 242 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 OR2A5Q96R48 311 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 F2RL3Q96RI0 385 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 GFM1Q96RP9 751 aaKnown RBP4.36□□□□□ -1.71
CDR2-203ENST00000563573 HBEGFQ99075 208 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 TBCDQ9BTW9 1192 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 C1orf50Q9BV19 199 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 SLC25A23Q9BV35 468 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 CCDC106Q9BWC9 280 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 MS4A8Q9BY19 250 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 MRPL1Q9BYD6 325 aaKnown RBP4.36□□□□□ -1.71
CDR2-203ENST00000563573 ACPTQ9BZG2 426 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 SLC7A5P2Q9GIP4 190 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 NMUR2Q9GZQ4 415 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 TWSG1Q9GZX9 223 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 CHRNA10Q9GZZ6 450 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 OR51B5Q9H339 312 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 SYNDIG1Q9H7V2 258 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 COPS7BQ9H9Q2 264 aaPredicted RBP4.36□□□□□ -1.71
CDR2-203ENST00000563573 EFCAB1Q9HAE3 211 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 TXLNGQ9NUQ3 528 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 ASIC5Q9NY37 505 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 ZIM2Q9NZV7 527 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 CCDC167Q9P0B6 97 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 TAGLN3Q9UI15 199 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 PSME2Q9UL46 239 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 SH2B3Q9UQQ2 575 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 KLHL20Q9Y2M5 609 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 CCL27Q9Y4X3 112 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 COPG1Q9Y678 874 aaKnown RBP4.36□□□□□ -1.71
CDR2-203ENST00000563573 CAPN7Q9Y6W3 813 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 SPACA6W5XKT8 324 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 SCN3AQ9NY46 2000 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 CABIN1Q9Y6J0 2220 aa4.36□□□□□ -1.71
CDR2-203ENST00000563573 ZNF318Q5VUA4 2279 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 MUC6Q6W4X9 2439 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 IGHV5-51A0A0C4DH38 117 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 LOC100653049A0A140TA62 436 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 FAM234BA2RU67 622 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 LRIT2A6NDA9 550 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 ERICH4A6NGS2 130 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 CCDC154A6NI56 674 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 H0YGG7 62 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 SAP18O00422 153 aaKnown RBP4.35□□□□□ -1.71
CDR2-203ENST00000563573 CDX4O14627 284 aaPredicted RBP4.35□□□□□ -1.71
CDR2-203ENST00000563573 MGST3O14880 152 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 ANGPT2O15123 496 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 ERI3O43414 337 aaKnown RBP4.35□□□□□ -1.71
CDR2-203ENST00000563573 KIF1CO43896 1103 aaKnown RBP4.35□□□□□ -1.71
CDR2-203ENST00000563573 SH3BP5O60239 455 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 PCDH7O60245 1069 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 KRT34O76011 436 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 NPPAP01160 153 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 IL6P05231 212 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 ALDOCP09972 364 aaKnown RBP4.35□□□□□ -1.71
CDR2-203ENST00000563573 G6PDP11413 515 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 BCKDHAP12694 445 aa4.35□□□□□ -1.71
CDR2-203ENST00000563573 COX4I1P13073 169 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms