RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ZIC1Q15915 447 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 CCDC158Q5M9N0 1113 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 SPATA46Q5T0L3 261 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 AGBL2Q5U5Z8 902 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 CD164L2Q6UWJ8 174 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 TFAP2EQ6VUC0 442 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 PIWIL3Q7Z3Z3 882 aaKnown RBP2□□□□□ -2.09
HMGB1P33-201ENST00000563485 TMEM126BQ8IUX1 230 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 CCDC83Q8IWF9 413 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 ZNF433Q8N7K0 673 aaPredicted RBP2□□□□□ -2.09
HMGB1P33-201ENST00000563485 RDH11Q8TC12 318 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 FAM46BQ96A09 425 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 ERP27Q96DN0 273 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 MRPL53Q96EL3 112 aaKnown RBP2□□□□□ -2.09
HMGB1P33-201ENST00000563485 CCDC114Q96M63 670 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 CITED2Q99967 270 aaPredicted RBP2□□□□□ -2.09
HMGB1P33-201ENST00000563485 JPH2Q9BR39 696 aaPredicted RBP2□□□□□ -2.09
HMGB1P33-201ENST00000563485 DPH7Q9BTV6 452 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 FUNDC2Q9BWH2 189 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 OPN3Q9H1Y3 402 aaPredicted RBP2□□□□□ -2.09
HMGB1P33-201ENST00000563485 TMEM206Q9H813 350 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 DDX28Q9NUL7 540 aaKnown RBP2□□□□□ -2.09
HMGB1P33-201ENST00000563485 DNAJB9Q9UBS3 223 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 ZNF221Q9UK13 617 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 PDE10AQ9Y233 779 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 ITM2BQ9Y287 266 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 SLC9A8Q9Y2E8 581 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 RPH3AQ9Y2J0 694 aaPredicted RBP2□□□□□ -2.09
HMGB1P33-201ENST00000563485 A0A0U1RQK1 487 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 EEF2KO00418 725 aaKnown RBP1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 MAGEB4O15481 346 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 CA11O75493 328 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 HSPA4LO95757 839 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 VDRP11473 427 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 SERPINB6P35237 376 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 UCP2P55851 309 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 LRRC63Q05C16 580 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 STX1AQ16623 288 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 HKDC1Q2TB90 917 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 EPC2Q52LR7 807 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 FAM133BQ5BKY9 247 aaKnown RBP1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 HOOK3Q86VS8 718 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 ERICH1Q86X53 443 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 CADM2Q8N3J6 435 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 LINC01555Q8NAE3 123 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 FNDC8Q8TC99 324 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 SRSF12Q8WXF0 261 aaKnown RBP1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 IL22RA2Q969J5 263 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 EPSTI1Q96J88 318 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 CPXM1Q96SM3 734 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 NAPBQ9H115 298 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 TSPY26PQ9H489 355 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 EHD1Q9H4M9 534 aa1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 ZNF331Q9NQX6 463 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 DNAJC17Q9NVM6 304 aaKnown RBP1.99□□□□□ -2.09
HMGB1P33-201ENST00000563485 ARHGAP21Q5T5U3 1957 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 DFNA5O60443 496 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 RANBP6O60518 1105 aaKnown RBP1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 TBCAO75347 108 aaKnown RBP1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 NOL4O94818 638 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 REC8O95072 547 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 CYP3A5P20815 502 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 STIP1P31948 543 aaKnown RBP1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 CAV2P51636 162 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 GEMP55040 296 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 LINC00315P59091 139 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 ST8SIA6P61647 398 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 TSPY1Q01534 308 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 ZNF528Q3MIS6 628 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 CDC42EP5Q6NZY7 148 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 ASRGL1Q7L266 308 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 MCOLN2Q8IZK6 566 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 NKAIN3Q8N8D7 197 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 TEKT1Q969V4 418 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 MARC2Q969Z3 335 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 DHTKD1Q96HY7 919 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 UTP14AQ9BVJ6 771 aaKnown RBP1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 TSSK1BQ9BXA7 367 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 SLC25A39Q9BZJ4 359 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 GANQ9H2C0 597 aa1.98□□□□□ -2.09
HMGB1P33-201ENST00000563485 MYO10Q9HD67 2058 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 C13orf42A0A1B0GVH6 325 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 LATO43561 262 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 GHRP10912 638 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 SCG2P13521 617 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 UGT1A3P35503 534 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 RBMXP38159 391 aaKnown RBP1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 POU3F4P49335 361 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 PPOXP50336 477 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 SLC26A2P50443 739 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 PRR4Q16378 134 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 ANKRD20A4Q4UJ75 823 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 ANKRD20A8PQ5CZ79 823 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 ANKRD20A2Q5SQ80 823 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 ANKRD20A1Q5TYW2 823 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 ANKRD20A3Q5VUR7 823 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 ATRAIDQ6UW56 229 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 IL34Q6ZMJ4 242 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 GBP6Q6ZN66 633 aa1.97□□□□□ -2.09
HMGB1P33-201ENST00000563485 TMEM179BQ7Z7N9 219 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms