RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ACSM1Q08AH1 577 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 NPRL3Q12980 569 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 EIF4EBP2Q13542 120 aaPredicted RBP4.38□□□□□ -1.71
LINC00254-201ENST00000563416 NUMA1Q14980 2115 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 PTPN20Q4JDL3 420 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 ZNF789Q5FWF6 425 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 TOR1AIP1Q5JTV8 583 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 C10orf120Q5SQS8 335 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 BSPRYQ5W0U4 402 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 ALS2CLQ60I27 953 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 ETFRF1Q6IPR1 90 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 TEX38Q6PEX7 206 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 ABRAXAS1Q6UWZ7 409 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 SLC47A2Q86VL8 602 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 NLRP14Q86W24 1093 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 ZNF677Q86XU0 584 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 BBS7Q8IWZ6 715 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 FBXO39Q8N4B4 442 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 HDDC3Q8N4P3 179 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 OLIG1Q8TAK6 271 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 FAM3CQ92520 227 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 NDRG1Q92597 394 aaKnown RBP4.38□□□□□ -1.71
LINC00254-201ENST00000563416 DAZLQ92904 295 aaKnown RBP4.38□□□□□ -1.71
LINC00254-201ENST00000563416 SPSB1Q96BD6 273 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 SLC47A1Q96FL8 570 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 PIWIL1Q96J94 861 aaKnown RBP4.38□□□□□ -1.71
LINC00254-201ENST00000563416 LRR1Q96L50 414 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 ZNF582Q96NG8 517 aaPredicted RBP4.38□□□□□ -1.71
LINC00254-201ENST00000563416 RUNDC3BQ96NL0 473 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 CPXM1Q96SM3 734 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 MYCBPQ99417 103 aaPredicted RBP4.38□□□□□ -1.71
LINC00254-201ENST00000563416 SLA2Q9H6Q3 261 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 EQTNQ9NQ60 294 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 PRMT8Q9NR22 394 aaPredicted RBP4.38□□□□□ -1.71
LINC00254-201ENST00000563416 ABCC13Q9NSE7 274 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 FAM207AQ9NSI2 230 aaPredicted RBP4.38□□□□□ -1.71
LINC00254-201ENST00000563416 DNAJC17Q9NVM6 304 aaKnown RBP4.38□□□□□ -1.71
LINC00254-201ENST00000563416 DUS2Q9NX74 493 aaKnown RBP4.38□□□□□ -1.71
LINC00254-201ENST00000563416 NOCTQ9UK39 431 aaKnown RBP4.38□□□□□ -1.71
LINC00254-201ENST00000563416 APPL1Q9UKG1 709 aa4.38□□□□□ -1.71
LINC00254-201ENST00000563416 HBS1LQ9Y450 684 aaKnown RBP4.38□□□□□ -1.71
LINC00254-201ENST00000563416 RIF1Q5UIP0 2472 aaKnown RBP4.38□□□□□ -1.71
LINC00254-201ENST00000563416 SSX4O60224 188 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 CACNG3O60359 315 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 CREG1O75629 220 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 SLC4A1P02730 911 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 DCNP07585 359 aaKnown RBP4.37□□□□□ -1.71
LINC00254-201ENST00000563416 TDGF1P13385 188 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 DNASE1P24855 282 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 ITGA3P26006 1051 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 ALDH4A1P30038 563 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 GSCP56915 257 aaPredicted RBP4.37□□□□□ -1.71
LINC00254-201ENST00000563416 CDR2Q01850 454 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 MELKQ14680 651 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 PON2Q15165 354 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 CDO1Q16878 200 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 ZNF528Q3MIS6 628 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 KIAA1644Q3SXP7 199 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 FILIP1LQ4L180 1135 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 FAM183BPQ6ZVS7 135 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 ARCQ7LC44 396 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 RABEPKQ7Z6M1 372 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 ISCA2Q86U28 154 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 LUZP1Q86V48 1076 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 CLYBLQ8N0X4 340 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 TMEM35BQ8NCS4 154 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 ZNF397Q8NF99 534 aaPredicted RBP4.37□□□□□ -1.71
LINC00254-201ENST00000563416 TRIM58Q8NG06 486 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 NEK11Q8NG66 645 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 EXD1Q8NHP7 514 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 RNF139Q8WU17 664 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 TMEM190Q8WZ59 177 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 AZIN2Q96A70 460 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 NXNL1Q96CM4 212 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 SYT11Q9BT88 431 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 TRIM62Q9BVG3 475 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 CACNG6Q9BXT2 260 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 NACA2Q9H009 215 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 MIS12Q9H081 205 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 LINC00597Q9H2U6 94 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 POPDC2Q9HBU9 364 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 SPHK2Q9NRA0 654 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 IARS2Q9NSE4 1012 aaKnown RBP4.37□□□□□ -1.71
LINC00254-201ENST00000563416 C2orf42Q9NWW7 574 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 NPAP1Q9NZP6 1156 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 SEPT10Q9P0V9 454 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 VPS18Q9P253 973 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 STOML2Q9UJZ1 356 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 LSM7Q9UK45 103 aaKnown RBP4.37□□□□□ -1.71
LINC00254-201ENST00000563416 NDRG2Q9UN36 371 aaKnown RBP4.37□□□□□ -1.71
LINC00254-201ENST00000563416 ZNF510Q9Y2H8 683 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 SPIN1Q9Y657 262 aaPredicted RBP4.37□□□□□ -1.71
LINC00254-201ENST00000563416 GVINP1Q7Z2Y8 2422 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 SDK1Q7Z5N4 2213 aa4.37□□□□□ -1.71
LINC00254-201ENST00000563416 PCDH15Q96QU1 1955 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 SPTBN4Q9H254 2564 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 DCHS1Q96JQ0 3298 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 A0A1W2PPM1 405 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.36□□□□□ -1.71
LINC00254-201ENST00000563416 NDC80O14777 642 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms