RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	BANF1	O75531	89 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	PRKRA	O75569	313 aa	Known RBP	7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	PPM1B	O75688	479 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	STK16	O75716	305 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	TGFB1	P01137	390 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	CT62	P0C5K7	136 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	GPX3	P22352	226 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	THBS2	P35442	1172 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	SSR2	P43308	183 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	ATP5J2	P56134	94 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	CLDN15	P56746	228 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	B3GALT5-AS1	P59052	145 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	RPS13	P62277	151 aa	Known RBP	7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	ZNF460	Q14592	562 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	SETDB1	Q15047	1291 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	PDK4	Q16654	411 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	OR2A2	Q6IF42	318 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	SULT1C3	Q6IMI6	304 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	ADAM5	Q6NVV9	412 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	NUP54	Q7Z3B4	507 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	TMEM171	Q8WVE6	324 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	CMTM7	Q96FZ5	175 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	NODAL	Q96S42	347 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	NXF5	Q9H1B4	397 aa	Known RBP	7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	DDX31	Q9H8H2	851 aa	Known RBP	7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	CNOT10	Q9H9A5	744 aa	Known RBP	7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	SERHL	Q9NQF3	203 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	PSD3	Q9NYI0	1048 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	HEY2	Q9UBP5	337 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	CTNNAL1	Q9UBT7	734 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	ROS1	P08922	2347 aa		7.51	□□□□□ -1.21
CKLF-208	ENST00000563092	ABCA1	O95477	2261 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	USF3	Q68DE3	2245 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092		A0A096LNT2	108 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	7.5	□□□□□ -1.21
CKLF-208	ENST00000563092		A0A1W2PS29	197 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	SAP18	O00422	153 aa	Known RBP	7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	HS3ST1	O14792	307 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	TMPRSS11D	O60235	418 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	OR10H2	O60403	315 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	ZIC3	O60481	467 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	FAM157C	P0CG43	387 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	POU2F1	P14859	743 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	PTMS	P20962	102 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	SRD5A2	P31213	254 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	TLX1	P31314	330 aa	Predicted RBP	7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	GCK	P35557	465 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	BSG	P35613	385 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	BUD31	P41223	144 aa	Predicted RBP	7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	PIK3CB	P42338	1070 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	HSPA7	P48741	367 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	STAR	P49675	285 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	NRG3	P56975	720 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	IRF8	Q02556	426 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	SRY	Q05066	204 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	MGAT2	Q10469	447 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	CHIT1	Q13231	466 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	TOMM20	Q15388	145 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	HIST2H2AC	Q16777	129 aa	Predicted RBP	7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	CLEC12B	Q2HXU8	276 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	KRTAP24-1	Q3LI83	254 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	BEX5	Q5H9J7	111 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	HIST2H2AA3	Q6FI13	130 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	MED27	Q6P2C8	311 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	ZNF704	Q6ZNC4	412 aa	Predicted RBP	7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	FRA10AC1	Q70Z53	315 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	ZNF550	Q7Z398	422 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	IFNE	Q86WN2	208 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	GRAMD2A	Q8IUY3	354 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	MAPK1IP1L	Q8NDC0	245 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	OR7G1	Q8NGA0	311 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	UBE2E3	Q969T4	207 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	MAGOHB	Q96A72	148 aa	Known RBP	7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	ESAM	Q96AP7	390 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	RGMA	Q96B86	450 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	PGM2	Q96G03	612 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	KRT12	Q99456	494 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	SLC39A3	Q9BRY0	314 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	OSBPL11	Q9BXB4	747 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	OPN3	Q9H1Y3	402 aa	Predicted RBP	7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	OR10A5	Q9H207	317 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	OR51B5	Q9H339	312 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	ACTR8	Q9H981	624 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	RNF122	Q9H9V4	155 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	GALNT9	Q9HCQ5	603 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	TAS2R10	Q9NYW0	307 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	MOCS1	Q9NZB8	636 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	ZNF639	Q9UID6	485 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	MAPRE3	Q9UPY8	281 aa		7.5	□□□□□ -1.21
CKLF-208	ENST00000563092	CR1	P17927	2039 aa		7.49	□□□□□ -1.21
CKLF-208	ENST00000563092	MEGF8	Q7Z7M0	2845 aa		7.49	□□□□□ -1.21
CKLF-208	ENST00000563092	FAM95C	A0A1B0GW59	222 aa		7.49	□□□□□ -1.21
CKLF-208	ENST00000563092	NCF1B	A6NI72	391 aa	Predicted RBP	7.49	□□□□□ -1.21
CKLF-208	ENST00000563092	NCF1C	A8MVU1	366 aa	Predicted RBP	7.49	□□□□□ -1.21
CKLF-208	ENST00000563092	T	O15178	435 aa		7.49	□□□□□ -1.21
CKLF-208	ENST00000563092	ACOX3	O15254	700 aa		7.49	□□□□□ -1.21
CKLF-208	ENST00000563092	UGT2B11	O75310	529 aa		7.49	□□□□□ -1.21
CKLF-208	ENST00000563092	TNFRSF21	O75509	655 aa		7.49	□□□□□ -1.21
CKLF-208	ENST00000563092	EED	O75530	441 aa	Known RBP	7.49	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms