RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 HNRNPCL2B2RXH8 293 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 HNRNPCL3B7ZW38 293 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 HMGN4O00479 90 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 PLD2O14939 933 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 SUV39H1O43463 412 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 HYAL3O43820 417 aaPredicted RBP9.62□□□□□ -0.87
USP3-219ENST00000561326 PRAMEF2O60811 474 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 ZNF682O95780 498 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 SERPINA1P01009 418 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 C1QCP02747 245 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 TFPTP0C1Z6 253 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 HNRNPCL4P0DMR1 293 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 PTGER1P34995 402 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 PGDP52209 483 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 EMP2P54851 167 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 RPS26P62854 115 aaKnown RBP9.62□□□□□ -0.87
USP3-219ENST00000561326 RHAGQ02094 409 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 EEF1A2Q05639 463 aaKnown RBP9.62□□□□□ -0.87
USP3-219ENST00000561326 MGAT2Q10469 447 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 MYBPC3Q14896 1274 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 ELAVL1Q15717 326 aaKnown RBP9.62□□□□□ -0.87
USP3-219ENST00000561326 GPAT3Q53EU6 434 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 LRRC23Q53EV4 343 aaPredicted RBP9.62□□□□□ -0.87
USP3-219ENST00000561326 PRAMEF8Q5VWM4 474 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 PRAMEF7Q5VXH5 474 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 FKBP9P1Q75LS8 142 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 EIF3MQ7L2H7 374 aaKnown RBP9.62□□□□□ -0.87
USP3-219ENST00000561326 SLC44A2Q8IWA5 706 aaPredicted RBP9.62□□□□□ -0.87
USP3-219ENST00000561326 PAPD5Q8NDF8 572 aaKnown RBP9.62□□□□□ -0.87
USP3-219ENST00000561326 OR14A16Q8NHC5 309 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 FBXO30Q8TB52 745 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 SLC38A5Q8WUX1 472 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 RASSF5Q8WWW0 418 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 SLC9A6Q92581 669 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 MAL2Q969L2 176 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 C16orf58Q96GQ5 468 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 OR7D2Q96RA2 312 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 STACQ99469 402 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 SEPHS2Q99611 448 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 YIPF4Q9BSR8 244 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 CNPPD1Q9BV87 410 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 TMEM121BQ9BXQ6 578 aaPredicted RBP9.62□□□□□ -0.87
USP3-219ENST00000561326 VN1R1Q9GZP7 353 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 VCX3BQ9H321 246 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 MAGIXQ9H6Y5 334 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 TRIM45Q9H8W5 580 aaPredicted RBP9.62□□□□□ -0.87
USP3-219ENST00000561326 WDR54Q9H977 334 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 CACYBPQ9HB71 228 aaKnown RBP9.62□□□□□ -0.87
USP3-219ENST00000561326 GIN1Q9NXP7 522 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 PRODH2Q9UF12 536 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 PISDQ9UG56 409 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 ZNF639Q9UID6 485 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 BAG5Q9UL15 447 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 PADI1Q9ULC6 663 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 PTPRBP23467 1997 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 USP34Q70CQ2 3546 aa9.62□□□□□ -0.87
USP3-219ENST00000561326 CNOT1A5YKK6 2376 aaKnown RBP9.61□□□□□ -0.87
USP3-219ENST00000561326 PTPRZ1P23471 2315 aaPredicted RBP9.61□□□□□ -0.87
USP3-219ENST00000561326 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 IGKV3D-11A0A0A0MRZ8 115 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 OR2W5A6NFC9 320 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 VSTM2BA6NLU5 285 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 C17orf105B2RV13 164 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 IDSB3KWA1 339 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 TGFBR3LH3BV60 316 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 M0QX08 132 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 PCDH17O14917 1159 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 PRKD3O94806 890 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 PGM3O95394 542 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 AK1P00568 194 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 BCHEP06276 602 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 CT62P0C5K7 136 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 RAP2AP10114 183 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 CEACAM1P13688 526 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 ETS2P15036 469 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 ITIH1P19827 911 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 S1PR1P21453 382 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 FASP25445 335 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 MAN2A2P49641 1150 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 SESN3P58005 492 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 SELENOWP63302 87 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 HPCAP84074 193 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 FUT7Q11130 342 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 EXOSC7Q15024 291 aaKnown RBP9.61□□□□□ -0.87
USP3-219ENST00000561326 NKG7Q16617 165 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 CYBRD1Q53TN4 286 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 CRB2Q5IJ48 1285 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 HES3Q5TGS1 186 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 ZNF385CQ66K41 422 aaPredicted RBP9.61□□□□□ -0.87
USP3-219ENST00000561326 C6orf15Q6UXA7 325 aaPredicted RBP9.61□□□□□ -0.87
USP3-219ENST00000561326 CBLL1Q75N03 491 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 COX15Q7KZN9 410 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 SLCO6A1Q86UG4 719 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 LAPTM4BQ86VI4 370 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 PRSS58Q8IYP2 241 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 ADGRG5Q8IZF4 528 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 SHISA5Q8N114 240 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 PQLC1Q8N2U9 271 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 MORN4Q8NDC4 146 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 OR52R1Q8NGF1 315 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms