RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ANXA4P09525 319 aaPredicted RBP14.66□□□□□ -0.06
LMX1B-204ENST00000561065 NEFHP12036 1026 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 GPX3P22352 226 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 MPIP34949 423 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 FEN1P39748 380 aaKnown RBP14.66□□□□□ -0.06
LMX1B-204ENST00000561065 ALDH9A1P49189 494 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 TMED10P49755 219 aaKnown RBP14.66□□□□□ -0.06
LMX1B-204ENST00000561065 KCNJ2P63252 427 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 RPP38P78345 283 aaKnown RBP14.66□□□□□ -0.06
LMX1B-204ENST00000561065 RAE1P78406 368 aaKnown RBP14.66□□□□□ -0.06
LMX1B-204ENST00000561065 BTKQ06187 659 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 TFF3Q07654 80 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 RPS6KA2Q15349 733 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 NNATQ16517 81 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 GXYLT1Q4G148 440 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 CCDC71Q8IV32 467 aaPredicted RBP14.66□□□□□ -0.06
LMX1B-204ENST00000561065 PRR22Q8IZ63 422 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 CLYBLQ8N0X4 340 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 EID3Q8N140 333 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 LRRC25Q8N386 305 aaPredicted RBP14.66□□□□□ -0.06
LMX1B-204ENST00000561065 TCP10LQ8TDR4 215 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 TP53INP1Q96A56 240 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 KLHL29Q96CT2 875 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 CNRIP1Q96F85 164 aaPredicted RBP14.66□□□□□ -0.06
LMX1B-204ENST00000561065 ZNF681Q96N22 645 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 NXF5Q9H1B4 397 aaKnown RBP14.66□□□□□ -0.06
LMX1B-204ENST00000561065 SLC6A15Q9H2J7 730 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 CENPHQ9H3R5 247 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 ZFP64Q9NPA5 681 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 NPDC1Q9NQX5 325 aaPredicted RBP14.66□□□□□ -0.06
LMX1B-204ENST00000561065 EHD3Q9NZN3 535 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 DLGAP4Q9Y2H0 992 aa14.66□□□□□ -0.06
LMX1B-204ENST00000561065 FAM90A27PA6NNH2 459 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 TP53I11O14683 189 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 TRIM3O75382 744 aaPredicted RBP14.65□□□□□ -0.06
LMX1B-204ENST00000561065 SEC22BO75396 215 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 RSL1D1O76021 490 aaKnown RBP14.65□□□□□ -0.06
LMX1B-204ENST00000561065 CBX7O95931 251 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 ATP1B1P05026 303 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 FGF4P08620 206 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 TIA1P31483 386 aaKnown RBP eCLIP14.65□□□□□ -0.06
LMX1B-204ENST00000561065 EXOSC7Q15024 291 aaKnown RBP14.65□□□□□ -0.06
LMX1B-204ENST00000561065 FNDC7Q5VTL7 733 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 DESI1Q6ICB0 168 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 VWA5B2Q8N398 1253 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 ADCY4Q8NFM4 1077 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 CA5BP1Q8WTZ4 195 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 ERP27Q96DN0 273 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 TREX2Q9BQ50 279 aaPredicted RBP14.65□□□□□ -0.06
LMX1B-204ENST00000561065 DOHHQ9BU89 302 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 ITPAQ9BY32 194 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 UCK2Q9BZX2 261 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 ENKD1Q9H0I2 346 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 SSU72Q9NP77 194 aaKnown RBP14.65□□□□□ -0.06
LMX1B-204ENST00000561065 CNIH4Q9P003 139 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 ZNF639Q9UID6 485 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 UTS2RQ9UKP6 389 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 BOKQ9UMX3 212 aaPredicted RBP14.65□□□□□ -0.06
LMX1B-204ENST00000561065 NPFFR2Q9Y5X5 522 aa14.65□□□□□ -0.06
LMX1B-204ENST00000561065 MED12Q93074 2177 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 NKX2-6A6NCS4 301 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 UBFD1O14562 309 aaKnown RBP14.64□□□□□ -0.07
LMX1B-204ENST00000561065 BCKDKO14874 412 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 TM9SF1O15321 606 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 SUSD5O60279 629 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 SPAG7O75391 227 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 IGFBP2P18065 325 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 ACVR2AP27037 513 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 MAN2A2P49641 1150 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 FOXA1P55317 472 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 PSPHP78330 225 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 HMGCS1Q01581 520 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 ZNF763Q0D2J5 394 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 PMPCAQ10713 525 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 MAP4K2Q12851 820 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 SLC10A1Q14973 349 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 PCLAFQ15004 111 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 ZNF585AQ6P3V2 769 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 LRIG3Q6UXM1 1119 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 RNF165Q6ZSG1 346 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 NUDCD3Q8IVD9 361 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 C17orf47Q8NEP4 570 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 SPPL2AQ8TCT8 520 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 DIO2Q92813 273 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 CTHRC1Q96CG8 243 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 NTNG2Q96CW9 530 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 C11orf24Q96F05 449 aaPredicted RBP14.64□□□□□ -0.07
LMX1B-204ENST00000561065 APIPQ96GX9 242 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 PKNOX2Q96KN3 472 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 BBS4Q96RK4 519 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 GATA5Q9BWX5 397 aaPredicted RBP14.64□□□□□ -0.07
LMX1B-204ENST00000561065 BRINP2Q9C0B6 783 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 TNFRSF12AQ9NP84 129 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 MIEF1Q9NQG6 463 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 COQ3Q9NZJ6 369 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 PRODH2Q9UF12 536 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 TMED5Q9Y3A6 229 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 ACTL7BQ9Y614 415 aa14.64□□□□□ -0.07
LMX1B-204ENST00000561065 TRGV5A0A0B4J1U4 118 aa14.63□□□□□ -0.07
LMX1B-204ENST00000561065 HCN1O60741 890 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms